Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   AR327_RS04990 Genome accession   NZ_CP014643
Coordinates   1052916..1053866 (+) Length   316 a.a.
NCBI ID   WP_031416542.1    Uniprot ID   W7S0H9
Organism   Lysinibacillus sphaericus strain OT4b.25     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1047916..1058866
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AR327_RS04970 (AR327_04970) - 1048428..1049573 (+) 1146 WP_031416547.1 M20 peptidase aminoacylase family protein -
  AR327_RS04975 (AR327_04975) - 1049573..1050397 (+) 825 WP_012295844.1 GNAT family N-acetyltransferase -
  AR327_RS04980 (AR327_04980) menC 1050419..1051525 (+) 1107 WP_036162369.1 o-succinylbenzoate synthase -
  AR327_RS04985 (AR327_04985) - 1051577..1052629 (+) 1053 WP_031416543.1 membrane protein -
  AR327_RS04990 (AR327_04990) ceuB 1052916..1053866 (+) 951 WP_031416542.1 ABC transporter permease Machinery gene
  AR327_RS04995 (AR327_04995) - 1053859..1054812 (+) 954 WP_031416540.1 iron chelate uptake ABC transporter family permease subunit -
  AR327_RS05000 (AR327_05000) - 1054809..1055570 (+) 762 WP_008175175.1 ABC transporter ATP-binding protein -
  AR327_RS05005 (AR327_05005) - 1055635..1056654 (+) 1020 WP_012295840.1 siderophore ABC transporter substrate-binding protein -
  AR327_RS05010 (AR327_05010) - 1056656..1056970 (+) 315 WP_012295839.1 antibiotic biosynthesis monooxygenase family protein -
  AR327_RS05015 (AR327_05015) - 1057075..1057614 (-) 540 WP_012295838.1 hypothetical protein -
  AR327_RS05020 (AR327_05020) - 1057955..1058857 (+) 903 WP_099805356.1 polyprenyl synthetase family protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34793.98 Da        Isoelectric Point: 10.1462

>NTDB_id=172935 AR327_RS04990 WP_031416542.1 1052916..1053866(+) (ceuB) [Lysinibacillus sphaericus strain OT4b.25]
MKIRYLLTATVVLSIVSLFIGVVDIKPSDLLDFQSEETRLFLISRVPRLVAILLAGAGMSIAGLIMQSLSRNKFVSPTTA
GTLDATRLGILISMMFFTNVTYFQKISFAFIFALAGTLLFMQILNRIKFKDAIFIPLIGLMYGNILSSVTTFFAYKANII
QNISAWLQGDFSLIMKGRYELLYISVPVLILAYIYANRFTVAGMGEDFAKNLGLSYKFVVNLGLVLVALISTTVVLTVGV
IPFLGLIIPNIISLFKGDNLAKTLPHTALLGMSFLLFCDILGRVLIFPYEIPISMTVGVIGSAIFLVMLFRGRAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=172935 AR327_RS04990 WP_031416542.1 1052916..1053866(+) (ceuB) [Lysinibacillus sphaericus strain OT4b.25]
ATGAAAATAAGATATCTTTTAACAGCAACTGTTGTGTTGTCTATAGTATCGCTATTTATCGGAGTAGTAGATATTAAACC
AAGTGATCTATTAGACTTCCAATCAGAAGAAACTAGACTATTTTTAATTAGTCGTGTACCCAGACTTGTTGCCATTTTGC
TAGCAGGCGCAGGTATGAGTATTGCTGGTTTAATTATGCAAAGCTTAAGTAGGAATAAGTTCGTATCACCAACGACAGCA
GGTACTTTAGATGCCACTCGACTGGGTATATTGATTTCCATGATGTTTTTCACAAATGTCACGTATTTCCAAAAAATTTC
CTTCGCTTTCATATTTGCTCTAGCCGGCACATTATTATTTATGCAAATATTAAATCGAATTAAGTTTAAAGATGCGATTT
TTATACCGCTTATTGGCTTAATGTATGGTAATATCTTGTCTTCCGTGACAACGTTCTTTGCCTATAAGGCAAATATTATC
CAAAACATTTCTGCATGGTTACAAGGAGATTTCTCGTTAATCATGAAAGGCCGTTATGAACTGTTATACATAAGTGTACC
AGTACTTATCTTAGCTTATATTTATGCCAATCGTTTTACAGTAGCCGGTATGGGTGAGGATTTTGCTAAAAATCTTGGCC
TATCCTATAAGTTTGTGGTGAATTTAGGCTTAGTATTGGTGGCTCTTATCTCCACAACAGTGGTGCTAACAGTAGGTGTC
ATTCCATTCCTTGGTTTGATTATACCGAATATTATTTCACTGTTTAAAGGTGATAATTTGGCAAAAACATTGCCACATAC
AGCATTACTTGGTATGTCCTTCTTATTATTCTGCGATATTTTAGGACGCGTACTGATATTCCCTTATGAGATACCAATTA
GTATGACTGTTGGTGTAATTGGAAGTGCTATCTTCCTAGTTATGTTGTTTAGGGGGAGAGCATATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB W7S0H9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment