Detailed information    

insolico Bioinformatically predicted

Overview


Name   luxP   Type   Regulator
Locus tag   VVCECT4999_RS22060 Genome accession   NZ_CP014637
Coordinates   1240507..1241607 (-) Length   366 a.a.
NCBI ID   WP_017421657.1    Uniprot ID   A0A2S3SAB2
Organism   Vibrio vulnificus strain CECT 4999     
Function   autoinducer sensor (predicted from homology)   
Competence regulation

Genomic Context


Location: 1235507..1246607
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VVCECT4999_RS22040 (VVCECT4999_20910) - 1235549..1236010 (-) 462 WP_011081676.1 Lrp/AsnC family transcriptional regulator -
  VVCECT4999_RS22045 (VVCECT4999_20915) - 1236158..1237132 (+) 975 WP_039447175.1 DMT family transporter -
  VVCECT4999_RS22050 (VVCECT4999_20920) - 1237281..1237940 (+) 660 WP_017421659.1 PilZ domain-containing protein -
  VVCECT4999_RS22055 (VVCECT4999_20925) luxQ 1237937..1240510 (-) 2574 WP_088900199.1 quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ -
  VVCECT4999_RS22060 (VVCECT4999_20930) luxP 1240507..1241607 (-) 1101 WP_017421657.1 autoinducer 2-binding periplasmic protein LuxP Regulator
  VVCECT4999_RS22065 (VVCECT4999_20935) traF 1241795..1242964 (-) 1170 WP_026050679.1 conjugal transfer protein TraF -
  VVCECT4999_RS22070 (VVCECT4999_20940) - 1243041..1243337 (-) 297 WP_017421655.1 GIY-YIG nuclease family protein -
  VVCECT4999_RS22075 (VVCECT4999_20945) - 1243337..1243999 (-) 663 WP_039447168.1 YceH family protein -
  VVCECT4999_RS22080 (VVCECT4999_20950) - 1244065..1244274 (-) 210 WP_017421653.1 hypothetical protein -
  VVCECT4999_RS22085 (VVCECT4999_20955) - 1244544..1244858 (+) 315 WP_011081685.1 DUF496 family protein -
  VVCECT4999_RS22090 (VVCECT4999_20960) - 1245028..1246356 (+) 1329 WP_039447165.1 MATE family efflux transporter -

Sequence


Protein


Download         Length: 366 a.a.        Molecular weight: 41367.91 Da        Isoelectric Point: 6.7734

>NTDB_id=172881 VVCECT4999_RS22060 WP_017421657.1 1240507..1241607(-) (luxP) [Vibrio vulnificus strain CECT 4999]
MKKILLTCLLASASFHVSSHTSEVLSGYWAYQEFLEKFPQQGVLTRELSQVVRNAPVPLKRHQSKPIRISVVFPGQQISD
YWVRNLSAFEKRMDKLQISYQINQVFTRPNADVKQQSVSLMEALKSKSDYLIFTLDTTRHRKFIEHVLDSSETKLILQNI
TTPVQAWDKRQPFLYVGFDHAEGSIALADKFKQLYPQGANYSVLYFSEGYVSDARGDTFIHQMNHSDRFALKSSFYTKAT
KASGYESAINSLERYPDVDFIYACSTDVALGAIDALKDLGRTNIKINGWGGGSAELDAIAAGDLDLTVMRMNDDTGIAMA
EAIKWDIEGRTVPTVFSGDFEVVTKEDSPEHIELLKKRAFRYSDQP

Nucleotide


Download         Length: 1101 bp        

>NTDB_id=172881 VVCECT4999_RS22060 WP_017421657.1 1240507..1241607(-) (luxP) [Vibrio vulnificus strain CECT 4999]
ATGAAAAAGATATTACTAACTTGTTTATTAGCGTCAGCAAGTTTTCATGTAAGCTCACATACGTCAGAAGTCCTCAGTGG
GTACTGGGCTTATCAAGAATTTTTGGAAAAATTTCCTCAACAAGGCGTGCTCACACGAGAACTGTCTCAGGTGGTTAGGA
ATGCGCCTGTGCCTTTAAAGCGTCATCAATCCAAGCCGATACGAATTTCAGTGGTATTTCCTGGTCAGCAGATCTCCGAT
TACTGGGTAAGAAATCTTTCTGCGTTTGAGAAACGCATGGATAAGCTGCAGATCAGTTACCAAATCAATCAGGTTTTCAC
GCGGCCAAATGCCGATGTTAAGCAGCAAAGCGTTTCCTTGATGGAAGCGTTAAAGAGCAAATCGGATTACCTCATTTTTA
CGCTCGATACGACGCGCCACCGCAAGTTCATTGAGCATGTATTAGACTCTTCCGAAACCAAGCTGATCCTGCAAAATATC
ACCACACCAGTTCAAGCGTGGGACAAAAGACAGCCATTTCTCTACGTCGGTTTTGACCATGCAGAAGGGAGCATTGCGCT
GGCCGATAAGTTTAAACAGCTCTACCCACAAGGTGCAAATTACTCGGTTCTCTACTTTTCAGAAGGTTATGTGAGTGATG
CTCGTGGCGACACCTTTATACATCAGATGAATCACAGTGACCGATTTGCCCTAAAAAGCTCTTTTTACACCAAAGCGACC
AAGGCCTCAGGCTATGAGTCCGCAATAAACAGTTTAGAGCGCTATCCTGATGTGGATTTTATCTACGCCTGTTCTACCGA
TGTGGCCCTTGGTGCCATTGATGCATTGAAAGATCTGGGTCGCACAAACATCAAGATCAATGGATGGGGTGGTGGTTCTG
CTGAGCTTGACGCAATCGCGGCAGGTGATCTTGATTTGACAGTAATGCGCATGAACGATGATACAGGAATCGCTATGGCT
GAGGCGATCAAATGGGACATTGAAGGAAGAACCGTCCCGACCGTCTTTTCTGGAGACTTTGAAGTGGTGACAAAAGAGGA
CTCGCCAGAACACATCGAACTATTGAAAAAACGCGCGTTTAGATATTCAGATCAGCCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2S3SAB2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxP Vibrio cholerae strain A1552

64.11

99.727

0.639


Multiple sequence alignment