Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   AZE34_RS06710 Genome accession   NZ_CP014567
Coordinates   1351300..1351965 (+) Length   221 a.a.
NCBI ID   WP_017175466.1    Uniprot ID   A0A3S7GW29
Organism   Staphylococcus hominis strain C34847     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1346300..1356965
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AZE34_RS06685 - 1346576..1346677 (+) 102 WP_017175470.1 SE2200 family small protein -
  AZE34_RS06690 (AZE34_06550) - 1346856..1348583 (-) 1728 WP_104993098.1 IS1182 family transposase -
  AZE34_RS06695 (AZE34_06555) - 1348921..1350396 (-) 1476 WP_017175469.1 alkaline phosphatase -
  AZE34_RS06700 - 1350778..1350951 (+) 174 WP_017175468.1 hypothetical protein -
  AZE34_RS06705 - 1351120..1351287 (+) 168 WP_017175467.1 hypothetical protein -
  AZE34_RS06710 (AZE34_06560) braR 1351300..1351965 (+) 666 WP_017175466.1 response regulator transcription factor Regulator
  AZE34_RS06715 (AZE34_06565) braS 1351971..1352867 (+) 897 WP_017175465.1 sensor histidine kinase Regulator
  AZE34_RS06720 (AZE34_06570) - 1352999..1353748 (+) 750 WP_017175464.1 ABC transporter ATP-binding protein -
  AZE34_RS06725 (AZE34_06575) - 1353750..1355705 (+) 1956 WP_017175463.1 FtsX-like permease family protein -
  AZE34_RS06730 (AZE34_06580) - 1355797..1356561 (+) 765 WP_017175462.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25323.13 Da        Isoelectric Point: 4.7234

>NTDB_id=172512 AZE34_RS06710 WP_017175466.1 1351300..1351965(+) (braR) [Staphylococcus hominis strain C34847]
MKVLIVEDDVVIAESLGNELSHWNYEVSIAKQFGNILEEFKTVEPELVLLDINLPTFNGYHWCQEIRKVSNVPIIFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLTVSNNEITVKGCKLVVDEATLYYNNDSVQLSFTELQILN
KLFQNAGKYVSRTAIIEKCWESENFIDDNTLAVNMTRLRKKLQSIGIVDFIETKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=172512 AZE34_RS06710 WP_017175466.1 1351300..1351965(+) (braR) [Staphylococcus hominis strain C34847]
ATGAAAGTATTGATTGTCGAAGATGATGTCGTCATTGCAGAAAGTCTAGGGAATGAACTCTCACATTGGAACTATGAAGT
GAGTATTGCTAAGCAGTTTGGTAATATTCTTGAAGAATTTAAAACTGTAGAACCTGAACTTGTGTTATTAGATATTAATT
TACCTACATTTAATGGTTATCATTGGTGCCAAGAGATACGTAAAGTATCTAATGTCCCAATTATTTTCATTAGTTCGCGT
ACTGACAATATGGATCAAATTATGGCAATTCAAATGGGCGGAGATGACTTTATTGAAAAGCCATTTAATTTGTCACTTAC
TATAGCGAAAATTCAAGCATTGTTACGTAGAACATATGATTTAACGGTTTCAAATAATGAAATTACTGTTAAAGGGTGTA
AGCTCGTTGTTGATGAAGCCACACTATATTACAACAATGACTCTGTACAACTTTCGTTTACTGAACTACAAATTTTGAAT
AAATTATTTCAAAATGCAGGGAAATATGTCAGTCGTACAGCAATCATTGAAAAATGTTGGGAATCGGAGAATTTTATTGA
TGATAATACGTTAGCAGTAAATATGACACGTCTACGTAAAAAACTGCAATCTATCGGTATTGTTGATTTCATTGAGACAA
AGAAAAATGTAGGATATAAGGTGTAA

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3S7GW29

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

76.923

100

0.769

Multiple sequence alignment