Detailed information NTG0172137

Bioinformatically predicted

Overview

• Name: recP/tkt
• Type: Machinery gene
• Locus tag: BAMY_RS08985
• Genome accession: NZ_CP017953
• Coordinates: 1807933..1809936 (+)
• Length: 667 a.a.
• NCBI ID: WP_025851089.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain Y14
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1802933..1814936

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAMY_RS20230	-	1803357..1803506 (+)	150	WP_003154013.1	hypothetical protein	-
BAMY_RS08950 (BAMY_08740)	-	1803493..1804323 (+)	831	WP_003154011.1	prohibitin family protein	-
BAMY_RS08955 (BAMY_08745)	-	1804351..1804800 (-)	450	WP_015388182.1	YndM family protein	-
BAMY_RS08960 (BAMY_08750)	-	1804942..1805370 (+)	429	WP_025851092.1	hypothetical protein	-
BAMY_RS08965 (BAMY_08755)	dinR/lexA	1805710..1806330 (-)	621	WP_003154004.1	transcriptional repressor LexA	Regulator
BAMY_RS08970 (BAMY_08760)	yneA	1806487..1806798 (+)	312	WP_003154001.1	cell division suppressor protein YneA	-
BAMY_RS08975 (BAMY_08765)	-	1806814..1807464 (+)	651	WP_003153998.1	YneB family resolvase-like protein	-
BAMY_RS08980 (BAMY_08770)	-	1807533..1807766 (+)	234	WP_003153997.1	DUF896 domain-containing protein	-
BAMY_RS08985 (BAMY_08775)	recP/tkt	1807933..1809936 (+)	2004	WP_025851089.1	transketolase	Machinery gene
BAMY_RS08990 (BAMY_08780)	sirA	1810088..1810534 (+)	447	WP_003153995.1	sporulation inhibitor of replication protein SirA	-
BAMY_RS08995 (BAMY_08785)	-	1810620..1810838 (+)	219	WP_003153994.1	YneF family protein	-
BAMY_RS09000 (BAMY_08790)	-	1810912..1811085 (-)	174	WP_012117647.1	aspartyl-phosphate phosphatase Spo0E family protein	-
BAMY_RS09005 (BAMY_08795)	-	1811287..1811994 (+)	708	WP_088037157.1	cytochrome c biogenesis protein CcdA	-
BAMY_RS09010 (BAMY_08800)	-	1812079..1812441 (+)	363	WP_007410327.1	response regulator	-
BAMY_RS09015 (BAMY_08805)	-	1812521..1813012 (+)	492	WP_088005392.1	CcdC family protein	-
BAMY_RS09020 (BAMY_08810)	-	1813040..1813468 (-)	429	WP_003153987.1	DUF2621 domain-containing protein	-
BAMY_RS09025 (BAMY_08815)	-	1813702..1814073 (-)	372	WP_003153985.1	Hsp20/alpha crystallin family protein	-
BAMY_RS09030 (BAMY_08820)	-	1814168..1814314 (-)	147	WP_003153984.1	small acid-soluble spore protein P	-
BAMY_RS09035 (BAMY_08825)	sspO	1814344..1814490 (-)	147	WP_003153982.1	acid-soluble spore protein SspO	-

Sequence

Protein

• Length: 667 a.a.
• Molecular weight: 72561.74 Da
• Isoelectric Point: 4.9050

>NTDB_id=172137 BAMY_RS08985 WP_025851089.1 1807933..1809936(+) (recP/tkt) [Bacillus amyloliquefaciens strain Y14]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVNPQNPGWFNRDRFVLSAGHGSMLLYSMLHLSG
YDLSIEDLKQFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLELGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIAELTAAIEKARQNDKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGLEESKLTKEAYAWTFEEDFYVPEEVYGHFNQAVKEAGSKKEQEWNELFAAYKE
KYPELAEQLSLGMKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGIAKKIPFFVGGSADLAGSNKTTIKNGGDFTAKDY
AGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLASLMGLPVTYVFTHDSIAVGEDGPTHEPVEQLA
SLRALPNLSVIRPADGNETAAAWKVAVQSQDHPTALVLTRQNLLTIDQQAEEAYAGVEKGAYTVSKAKTDSPDALLLATG
SEVGLAIEAQAKLAEENIHVSVVSMPSWDRFEKQSAEYKNSVLPPNVTKRLAIEMGSSFGWGKFTGLEGDVLAIDRFGAS
APGETIMKEYGFTAENVVDRVKKLLNK

Nucleotide

• Length: 2004 bp

>NTDB_id=172137 BAMY_RS08985 WP_025851089.1 1807933..1809936(+) (recP/tkt) [Bacillus amyloliquefaciens strain Y14]
ATGGATACAATTGAAAAGAAATCAGTTGCCACCATTCGTACACTATCTATAGACGCAATTGAAAAAGCGAATTCCGGACA
TCCGGGCATGCCGATGGGAGCCGCTCCGATGGCATACACGCTGTGGACGAAATTTATGAATGTAAATCCGCAGAATCCGG
GCTGGTTTAACCGCGACCGCTTTGTTTTATCAGCAGGCCACGGTTCAATGCTTTTATACAGCATGCTGCATTTAAGCGGA
TATGACCTCAGCATTGAAGACTTGAAACAGTTCCGTCAATGGGGAAGCAAAACACCGGGACATCCGGAGTTCGGGCATAC
AGCCGGAGTAGACGCAACGACCGGGCCGCTTGGACAGGGGATTGCAATGGCAGTGGGAATGGCAATTGCAGAACGCCATC
TGGCTGAGACATATAACCGTGATTCATTCAACGTAGTTGATCATTATACATACAGTATTTGCGGAGACGGCGATTTAATG
GAAGGCATTTCTTCCGAAGCCGCTTCTCTTGCAGGCCATCTTGAATTAGGCCGCCTGATCGTATTATACGATTCTAATGA
CATTTCCTTAGACGGCGATTTAGACCGTTCTTTCTCTGAAAATGTAAAGCAGCGTTTTGAAGCAATGAACTGGGAAGTTC
TTTATGTTGAGGACGGAAACAACATCGCTGAATTGACGGCTGCAATTGAAAAAGCGCGCCAGAATGATAAAAAACCGACT
TTGATTGAAGTGAAAACCACGATCGGTTTCGGATCTCCAAACCGCGCGGGCACATCCGGCGTTCACGGCGCTCCGTTAGG
ACTAGAAGAGAGCAAGCTGACAAAAGAAGCGTATGCTTGGACGTTTGAAGAAGATTTTTATGTTCCGGAAGAAGTATACG
GGCATTTCAATCAAGCTGTAAAAGAAGCCGGCTCGAAAAAAGAACAGGAATGGAATGAACTGTTCGCGGCTTATAAAGAA
AAATATCCTGAGCTTGCTGAACAGCTGTCACTCGGCATGAAAGGCGAGCTTCCTAAAGACTGGGATCAGGAAGTTCCCGT
TTATGAAAAAGGCAGCAGCCTTGCTTCCCGCGCATCTTCAGGTGAGGTGCTGAACGGGATCGCCAAGAAAATTCCTTTCT
TTGTCGGGGGATCTGCTGACCTTGCGGGTTCAAATAAAACGACAATCAAAAATGGAGGAGACTTCACGGCCAAAGACTAC
GCCGGGAAAAACTTCTGGTTCGGTGTCCGTGAATTTGCGATGGGCGCTGCATTAAACGGAATGGCGCTTCACGGCGGCCT
CCGCGTATTCGGCGGCACATTCTTTGTATTCTCTGATTATTTAAGACCTGCCATTCGTCTGGCATCATTGATGGGACTCC
CTGTCACTTATGTATTCACGCATGACAGTATTGCCGTAGGAGAAGACGGGCCGACTCACGAACCGGTTGAGCAGCTTGCT
TCTTTACGCGCACTTCCTAACCTTTCTGTGATCAGACCTGCTGACGGAAATGAAACCGCAGCTGCATGGAAGGTTGCCGT
TCAAAGCCAAGATCATCCGACAGCTCTTGTATTGACACGCCAAAACCTGCTGACGATTGATCAGCAGGCTGAAGAAGCGT
ATGCGGGCGTGGAAAAAGGGGCTTATACCGTTTCCAAAGCAAAAACCGATTCACCGGACGCCCTTCTTTTAGCGACAGGC
TCTGAAGTCGGACTTGCGATCGAAGCTCAAGCGAAACTGGCTGAAGAAAACATTCACGTATCTGTAGTCAGCATGCCGAG
CTGGGACCGCTTTGAAAAACAATCGGCTGAGTACAAAAACAGCGTGCTTCCTCCGAATGTGACGAAACGTCTTGCGATCG
AAATGGGTTCAAGCTTCGGATGGGGCAAATTTACCGGTCTTGAAGGAGACGTTCTCGCAATTGACCGTTTCGGTGCTTCA
GCTCCGGGAGAAACAATTATGAAAGAATACGGGTTTACTGCAGAAAACGTAGTTGACCGCGTGAAAAAACTTCTAAACAA
ATAA

Domains

Predicted by InterProScan.

• Transketolase, pyrimidine binding domain (Transket_pyr) (354-523)

• Transketolase, thiamine diphosphate binding domain (Transketolase_N) (5-338)

• Transketolase, C-terminal domain (Transketolase_C) (548-657)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recP/tkt	Streptococcus pneumoniae TIGR4	56.344	99.25	0.559