Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | AWV81_RS13390 | Genome accession | NZ_CP014471 |
| Coordinates | 2470521..2470931 (-) | Length | 136 a.a. |
| NCBI ID | WP_009967785.1 | Uniprot ID | A0A6I4D881 |
| Organism | Bacillus subtilis subsp. natto strain CGMCC 2108 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
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Genomic Context
Location: 2465521..2475931
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AWV81_RS13355 (AWV81_13350) | - | 2465609..2465749 (+) | 141 | WP_003226124.1 | sporulation histidine kinase inhibitor Sda | - |
| AWV81_RS13365 (AWV81_13360) | yqeF | 2466055..2466786 (-) | 732 | WP_003229964.1 | SGNH/GDSL hydrolase family protein | - |
| AWV81_RS13370 (AWV81_13365) | cwlH | 2467038..2467790 (-) | 753 | WP_014480318.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| AWV81_RS13375 (AWV81_13370) | yqeD | 2467977..2468603 (+) | 627 | WP_014480319.1 | TVP38/TMEM64 family protein | - |
| AWV81_RS13380 (AWV81_13375) | gnd | 2468622..2469515 (-) | 894 | WP_014480320.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
| AWV81_RS13385 (AWV81_13380) | yqeB | 2469766..2470488 (+) | 723 | WP_014480321.1 | hypothetical protein | - |
| AWV81_RS13390 (AWV81_13385) | nucA/comI | 2470521..2470931 (-) | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | Machinery gene |
| AWV81_RS13395 (AWV81_13390) | sigK | 2471127..2471855 (+) | 729 | WP_013308023.1 | RNA polymerase sporulation sigma factor SigK | - |
| AWV81_RS23110 (AWV81_13395) | - | 2471855..2471953 (+) | 99 | WP_031600702.1 | hypothetical protein | - |
| AWV81_RS23690 | - | 2471950..2472162 (-) | 213 | Protein_2581 | recombinase family protein | - |
| AWV81_RS13410 (AWV81_13405) | fumC | 2472381..2473769 (-) | 1389 | WP_014480325.1 | class II fumarate hydratase | - |
| AWV81_RS13415 (AWV81_13410) | - | 2473936..2474826 (+) | 891 | WP_014480326.1 | LysR family transcriptional regulator | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 14967.97 Da Isoelectric Point: 5.1853
>NTDB_id=171739 AWV81_RS13390 WP_009967785.1 2470521..2470931(-) (nucA/comI) [Bacillus subtilis subsp. natto strain CGMCC 2108]
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
Nucleotide
Download Length: 411 bp
>NTDB_id=171739 AWV81_RS13390 WP_009967785.1 2470521..2470931(-) (nucA/comI) [Bacillus subtilis subsp. natto strain CGMCC 2108]
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
62.609 |
84.559 |
0.529 |