Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   AWV81_RS04645 Genome accession   NZ_CP014471
Coordinates   905591..906385 (+) Length   264 a.a.
NCBI ID   WP_014479217.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. natto strain CGMCC 2108     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 900591..911385
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AWV81_RS04615 (AWV81_04610) sxzA 901431..902462 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  AWV81_RS04620 (AWV81_04615) yfhB 902577..903458 (+) 882 WP_014479213.1 PhzF family phenazine biosynthesis isomerase -
  AWV81_RS04625 (AWV81_04620) yfhC 903546..904130 (+) 585 WP_033881364.1 nitroreductase -
  AWV81_RS04630 (AWV81_04625) yfhD 904169..904360 (-) 192 WP_014479215.1 YfhD family protein -
  AWV81_RS04635 (AWV81_04630) yfhE 904426..904536 (-) 111 WP_003223230.1 YfhE family protein -
  AWV81_RS04640 (AWV81_04635) yfhF 904591..905502 (-) 912 WP_014479216.1 TIGR01777 family oxidoreductase -
  AWV81_RS04645 (AWV81_04640) recX 905591..906385 (+) 795 WP_014479217.1 recombination regulator RecX Regulator
  AWV81_RS04650 (AWV81_04645) yfhH 906387..906701 (+) 315 WP_003244592.1 YfhH family protein -
  AWV81_RS04660 (AWV81_04655) yfhI 906844..908037 (+) 1194 WP_003243500.1 MFS transporter -
  AWV81_RS04665 (AWV81_04660) sspK 908069..908221 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  AWV81_RS04670 (AWV81_04665) yfhJ 908346..908615 (+) 270 WP_003243789.1 YfhJ family protein -
  AWV81_RS04675 (AWV81_04670) yfhK 908760..909278 (+) 519 WP_014479218.1 SH3 domain-containing protein -
  AWV81_RS04680 (AWV81_04675) spdL 909363..909695 (+) 333 WP_014479219.1 SdpC immunity protein SpdL -
  AWV81_RS04685 (AWV81_04680) ephM 909682..910542 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31029.21 Da        Isoelectric Point: 6.6686

>NTDB_id=171700 AWV81_RS04645 WP_014479217.1 905591..906385(+) (recX) [Bacillus subtilis subsp. natto strain CGMCC 2108]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAIK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=171700 AWV81_RS04645 WP_014479217.1 905591..906385(+) (recX) [Bacillus subtilis subsp. natto strain CGMCC 2108]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATTAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992

Multiple sequence alignment