Detailed information NTG0171609

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: BLD41_RS06410
• Genome accession: NZ_CP017859
• Coordinates: 1159564..1160523 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: Q0P9A8
• Organism: Campylobacter jejuni strain YQ2210
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1154564..1165523

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BLD41_RS06390 (BLD41_06390)	neuC	1155128..1156243 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
BLD41_RS10375	-	1156240..1157154 (+)	915	Protein_1206	beta-1,4-N-acetylgalactosaminyltransferase	-
BLD41_RS10380 (BLD41_06395)	-	1157188..1157850 (+)	663	WP_032596875.1	acylneuraminate cytidylyltransferase	-
BLD41_RS06400 (BLD41_06400)	-	1157845..1158697 (-)	853	Protein_1208	glycosyltransferase	-
BLD41_RS06405 (BLD41_06405)	waaV	1158681..1159505 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
BLD41_RS06410 (BLD41_06410)	waaF	1159564..1160523 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
BLD41_RS06415 (BLD41_06415)	gmhA	1160504..1161064 (-)	561	WP_002875424.1	D-sedoheptulose 7-phosphate isomerase	-
BLD41_RS06420 (BLD41_06420)	rfaE1	1161061..1162446 (-)	1386	WP_002858114.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
BLD41_RS06425 (BLD41_06425)	rfaD	1162439..1163392 (-)	954	WP_052794327.1	ADP-glyceromanno-heptose 6-epimerase	-
BLD41_RS06430 (BLD41_06430)	gmhB	1163389..1163953 (-)	565	Protein_1214	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
BLD41_RS06435 (BLD41_06435)	-	1164034..1164336 (+)	303	WP_002852762.1	cytochrome c	-
BLD41_RS06440 (BLD41_06440)	ccoS	1164359..1164565 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=171609 BLD41_RS06410 WP_002875425.1 1159564..1160523(+) (waaF) [Campylobacter jejuni strain YQ2210]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=171609 BLD41_RS06410 WP_002875425.1 1159564..1160523(+) (waaF) [Campylobacter jejuni strain YQ2210]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

3D structure

• AlphaFold DB: Q0P9A8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1