Detailed information NTG0171396

Bioinformatically predicted

Overview

• Name: sbcB
• Type: Machinery gene
• Locus tag: BG256_RS00605
• Genome accession: NZ_CP017811
• Coordinates: 100858..102279 (-)
• Length: 473 a.a.
• NCBI ID: WP_071162510.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain NML-Hia-1
• Function: promote homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 95858..107279

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BG256_RS00585 (BG256_00585)	pstA	96476..97324 (+)	849	WP_005650601.1	phosphate ABC transporter permease PstA	-
BG256_RS00590 (BG256_00590)	pstB	97334..98101 (+)	768	WP_005650603.1	phosphate ABC transporter ATP-binding protein PstB	-
BG256_RS00595 (BG256_00595)	phoB	98198..98893 (+)	696	WP_005650606.1	phosphate regulon transcriptional regulator PhoB	-
BG256_RS00600 (BG256_00600)	phoR	98890..100167 (+)	1278	WP_013527694.1	phosphate regulon sensor histidine kinase PhoR	-
BG256_RS00605 (BG256_00605)	sbcB	100858..102279 (-)	1422	WP_071162510.1	exodeoxyribonuclease I	Machinery gene
BG256_RS00610 (BG256_00610)	-	102292..103167 (-)	876	WP_071162511.1	hypothetical protein	-
BG256_RS00615 (BG256_00615)	-	103170..104078 (-)	909	Protein_125	DUF5655 domain-containing protein	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 54352.66 Da
• Isoelectric Point: 5.4158

>NTDB_id=171396 BG256_RS00605 WP_071162510.1 100858..102279(-) (sbcB) [Haemophilus influenzae strain NML-Hia-1]
MARDFSFFIYDYESFGVNPATDRPAQFAGIRTDADFNIIGKPIMFYCKQTNDYLPAPEAVMVTGITPQECNEKGLSEPEF
AANILAEFSQPNTCVMGYNNIRYDDEMTRYTFYRNLIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSF
RLEKLTKANGIEHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMTPLVHVSGMLGNYRGNCT
WVAPLAWHPTNQNALIVCDLTGDIDNLLAKSADELRTDLYTKKSELEERGVSSVPLKLVHINKCPILAPAKTLLPETADR
LGINRQLCFDNLAKLRASFDIREKVADIFNEERQFASNDNVETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKR
ILELLFHYRARHFYKTLTRAEQIKWKKYRQNKLEKSAVEFESSLQRLAEEHSDNSEKLSLLQQVYEYGIKLLG

Nucleotide

• Length: 1422 bp

>NTDB_id=171396 BG256_RS00605 WP_071162510.1 100858..102279(-) (sbcB) [Haemophilus influenzae strain NML-Hia-1]
ATGGCAAGAGATTTCAGCTTTTTTATTTACGATTATGAAAGTTTTGGTGTAAATCCAGCAACAGATCGTCCTGCGCAATT
TGCGGGTATTCGTACAGATGCCGATTTTAATATCATTGGTAAACCAATAATGTTTTATTGTAAACAAACCAACGATTATT
TACCGGCTCCTGAAGCCGTAATGGTCACAGGAATTACGCCGCAAGAATGTAATGAAAAGGGGCTTTCAGAGCCTGAATTC
GCCGCAAATATCTTAGCAGAATTTTCCCAACCCAATACTTGTGTCATGGGTTATAACAATATTCGCTATGATGATGAAAT
GACGCGTTATACGTTTTATCGTAATCTTATTGATCCTTATGAATACAGCTGGAAAAATGGGAATTCACGCTGGGATTTGT
TAGATTTAGTACGAGCCTGTTATGCCTTGCGTCCAGAAGGGATTAATTGGGCTTATGACGATGATGGAATGCCAAGTTTC
CGCTTAGAAAAACTCACTAAAGCAAATGGTATTGAGCATGAAAATGCTCACGATGCCATGGCGGATGTATATGCAACTAT
TGCTATGGCGAAATTAATTAAAGAAAAACAGCCTAAATTATTCCAATATTTCTTTGAAAATCGCGGTAAAAAAGAAATCG
AAAAATTAGTTGATACAGGCGCAATGACACCTTTAGTGCATGTTTCTGGAATGCTAGGGAATTATCGTGGAAATTGCACT
TGGGTTGCACCTTTAGCTTGGCATCCGACAAATCAAAATGCACTCATTGTTTGTGATTTAACTGGCGACATCGATAATTT
ATTAGCCAAAAGTGCGGATGAATTACGGACAGATTTATATACCAAAAAATCTGAATTAGAAGAAAGAGGAGTTTCATCTG
TTCCGTTAAAGCTTGTGCATATCAATAAATGTCCTATTTTAGCACCAGCTAAAACTTTGTTACCAGAAACAGCAGATCGA
TTGGGTATTAATCGACAATTATGCTTTGATAATCTTGCAAAATTACGAGCATCTTTTGATATTCGTGAAAAAGTGGCGGA
TATTTTTAATGAAGAACGTCAATTTGCATCGAATGATAATGTAGAAACTGAGTTATACAATGGCTTTTTTAGCAATGCTG
ATAAAAATAATATGGCTATTTTACGTAGTTTACCTGCAGAAAAATTATCTGAACATGGTTTAGCTTTTGAAGATAAACGT
ATCCTTGAATTATTGTTCCATTATCGCGCTCGTCATTTTTATAAAACCCTCACACGCGCTGAACAAATTAAATGGAAAAA
ATACCGACAGAATAAACTTGAAAAAAGTGCGGTAGAGTTTGAATCAAGTTTACAGCGTTTAGCTGAGGAACATTCAGATA
ATTCTGAAAAACTATCTTTGCTACAACAAGTATATGAATATGGTATAAAATTACTAGGTTAG

Domains

Predicted by InterProScan.

• Exonuclease C-terminal (ExoI_SH3) (208-468)

• Exonuclease (RNase_T) (9-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sbcB	Vibrio cholerae O1 biovar El Tor strain E7946	54.506	98.52	0.537