Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   BKP58_RS15870 Genome accession   NZ_CP017763
Coordinates   2958582..2959295 (+) Length   237 a.a.
NCBI ID   WP_014481000.1    Uniprot ID   -
Organism   Bacillus subtilis strain 29R7-12     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2953582..2964295
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BKP58_RS15835 (BKP58_15800) rppI 2953829..2954305 (+) 477 WP_014481002.1 8-oxo-dGTP diphosphatase -
  BKP58_RS15840 (BKP58_15805) rapZ 2954330..2955217 (+) 888 WP_003243903.1 RNase adapter RapZ -
  BKP58_RS15845 (BKP58_15810) mgfK 2955219..2956172 (+) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  BKP58_RS15850 (BKP58_15815) whiA 2956195..2957145 (+) 951 WP_003228147.1 DNA-binding protein WhiA -
  BKP58_RS15855 (BKP58_15820) crh 2957169..2957426 (+) 258 WP_003219835.1 HPr family phosphocarrier protein -
  BKP58_RS15860 (BKP58_15825) yvcN 2957427..2958191 (+) 765 WP_015251150.1 arylamine N-acetyltransferase family protein -
  BKP58_RS15865 (BKP58_15830) - 2958227..2958435 (-) 209 Protein_3060 hypothetical protein -
  BKP58_RS15870 (BKP58_15835) braR 2958582..2959295 (+) 714 WP_014481000.1 two-component system response regulator PsdR Regulator
  BKP58_RS15875 (BKP58_15840) psdS 2959289..2960359 (+) 1071 WP_014480999.1 two-component sensor histidine kinase PsdS -
  BKP58_RS15880 (BKP58_15845) psdA 2960442..2961221 (+) 780 WP_014480998.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  BKP58_RS15885 (BKP58_15850) psdB 2961196..2963136 (+) 1941 WP_014480997.1 lantibiotic ABC transporter permease PsdB -
  BKP58_RS15890 (BKP58_15855) ghrB 2963173..2964150 (-) 978 WP_072592561.1 2-hydroxyacid dehydrogenase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27541.46 Da        Isoelectric Point: 4.6774

>NTDB_id=171349 BKP58_RS15870 WP_014481000.1 2958582..2959295(+) (braR) [Bacillus subtilis strain 29R7-12]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RIDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSSRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=171349 BKP58_RS15870 WP_014481000.1 2958582..2959295(+) (braR) [Bacillus subtilis strain 29R7-12]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGATTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGATCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGTGGGCTGACGATTTATCCTGATCAAAATGAGGCCGAATGGAACAGCTCCCGTATTCTGTTTTCCCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTTTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCCGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.982

94.515

0.435