Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   BKP58_RS12405 Genome accession   NZ_CP017763
Coordinates   2294358..2295206 (+) Length   282 a.a.
NCBI ID   WP_003226832.1    Uniprot ID   P26497
Organism   Bacillus subtilis strain 29R7-12     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2289358..2300206
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BKP58_RS12385 (BKP58_12370) rsmG 2291173..2291892 (+) 720 WP_014481512.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -
  BKP58_RS12390 (BKP58_12375) noc 2292014..2292865 (+) 852 WP_003226829.1 nucleoid occlusion protein -
  BKP58_RS12395 (BKP58_12380) yyaB 2292916..2293356 (-) 441 WP_014481510.1 PH domain-containing protein -
  BKP58_RS12400 (BKP58_12385) soj 2293604..2294365 (+) 762 WP_003219244.1 sporulation initiation inhibitor protein Soj -
  BKP58_RS12405 (BKP58_12390) spo0J 2294358..2295206 (+) 849 WP_003226832.1 stage 0 sporulation protein Spo0J Regulator
  BKP58_RS12410 (BKP58_12395) yyaC 2295246..2295863 (-) 618 WP_003243890.1 spore protease YyaC -
  BKP58_RS12415 (BKP58_12400) - 2296323..2297339 (+) 1017 WP_010886647.1 membrane protein -
  BKP58_RS12420 (BKP58_12405) yyzM 2297433..2297639 (+) 207 WP_003226838.1 DUF951 domain-containing protein -
  BKP58_RS12425 (BKP58_12410) yyaE 2297690..2299693 (+) 2004 WP_014481509.1 molybdopterin-dependent oxidoreductase -

Sequence

Protein


Download         Length: 282 a.a.        Molecular weight: 32210.16 Da        Isoelectric Point: 8.3881

>NTDB_id=171328 BKP58_RS12405 WP_003226832.1 2294358..2295206(+) (spo0J) [Bacillus subtilis strain 29R7-12]
MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELKESVLQHGILQPLIVRKSLKGYDIVAGERR
FRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLT
LPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESY
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES

Nucleotide


Download         Length: 849 bp        

>NTDB_id=171328 BKP58_RS12405 WP_003226832.1 2294358..2295206(+) (spo0J) [Bacillus subtilis strain 29R7-12]
ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTAGATTTGTCTGAAGAGACAGTTGAAGAAATTAA
AATTGCCGATTTACGCCCTAATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAACTAAAAGAATCTG
TGCTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAAATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGT
TTTCGAGCGGCAAAGCTGGCAGGTTTAGATACAGTTCCGGCCATTGTCCGTGAATTATCAGAGGCGTTAATGAGGGAAAT
TGCTTTATTAGAAAATCTTCAGCGTGAAGATTTATCTCCGCTTGAAGAGGCTCAGGCATATGACTCCTTGTTGAAACACT
TAGATCTCACACAAGAGCAGCTTGCCAAACGTCTTGGGAAAAGCAGACCGCATATTGCGAATCATTTAAGACTGCTGACA
CTGCCAGAAAATATTCAGCAGCTTATTGCCGAAGGTACGCTTTCTATGGGACATGGACGCACGCTTCTTGGCTTAAAAAA
CAAAAATAAGCTTGAACCGCTGGTACAAAAAGTGATTGCGGAGCAGCTCAATGTTCGCCAGCTTGAGCAGCTGATTCAGC
AGTTGAATCAGAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTGAAAGATGCGGTTCTAAAAGAGCGAGAATCCTAT
CTCCAAAATTATTTTGGAACAACAGTTAATATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA
TGAAGACCTTGACCGGATTTTAGAGCTTTTGTCTGAACGAGAATCATAA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(163-214)

ParB/Sulfiredoxin domain (ParB_N)

(24-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 5NOC
  PDB 6SDK

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.923

92.199

0.387