Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   BKP58_RS02180 Genome accession   NZ_CP017763
Coordinates   377231..377848 (+) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain 29R7-12     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 372231..382848
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BKP58_RS02145 (BKP58_02150) ynzD 372473..372646 (+) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  BKP58_RS02150 (BKP58_02155) yneF 372720..372938 (-) 219 WP_003221221.1 YneF family protein -
  BKP58_RS02155 (BKP58_02160) sirA 373024..373470 (-) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  BKP58_RS02160 (BKP58_02165) recP/tkt 373623..375626 (-) 2004 WP_014476936.1 transketolase Machinery gene
  BKP58_RS02165 (BKP58_02170) ynzC 375795..376028 (-) 234 WP_003231595.1 DUF896 domain-containing protein -
  BKP58_RS02170 (BKP58_02175) dinL 376092..376745 (-) 654 WP_014479938.1 YneB family resolvase-like protein -
  BKP58_RS02175 (BKP58_02180) yneA 376764..377081 (-) 318 WP_003231598.1 cell division suppressor protein YneA -
  BKP58_RS02180 (BKP58_02185) dinR/lexA 377231..377848 (+) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  BKP58_RS23110 - 378135..378474 (-) 340 Protein_431 hypothetical protein -
  BKP58_RS02190 (BKP58_02195) fosM 378398..378817 (-) 420 WP_014479937.1 FosM family fosfomycin resistance protein -
  BKP58_RS02195 (BKP58_02200) - 379026..379475 (+) 450 WP_014479935.1 YndM family protein -
  BKP58_RS02200 (BKP58_02205) pghL 379502..380260 (-) 759 WP_014479934.1 gamma-polyglutamate hydrolase PghL -
  BKP58_RS02205 (BKP58_02210) - 380485..380799 (-) 315 Protein_435 hypothetical protein -
  BKP58_RS02210 (BKP58_02215) yndJ 380889..382529 (-) 1641 WP_014479931.1 YndJ family protein -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=171253 BKP58_RS02180 WP_003238209.1 377231..377848(+) (dinR/lexA) [Bacillus subtilis strain 29R7-12]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=171253 BKP58_RS02180 WP_003238209.1 377231..377848(+) (dinR/lexA) [Bacillus subtilis strain 29R7-12]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGAGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCAGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCAATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1