Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | BKN48_RS13780 | Genome accession | NZ_CP017676 |
| Coordinates | 2635878..2637008 (+) | Length | 376 a.a. |
| NCBI ID | WP_070548671.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain VV2 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2630878..2642008
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BKN48_RS13760 (BKN48_13760) | - | 2632087..2632425 (+) | 339 | WP_021481280.1 | hypothetical protein | - |
| BKN48_RS13765 (BKN48_13765) | - | 2632438..2633358 (+) | 921 | WP_070548669.1 | DUF5655 domain-containing protein | - |
| BKN48_RS13770 (BKN48_13770) | - | 2633464..2634534 (+) | 1071 | WP_236824382.1 | hypothetical protein | - |
| BKN48_RS13775 (BKN48_13775) | - | 2634578..2635732 (+) | 1155 | WP_070548670.1 | lysozyme inhibitor LprI family protein | - |
| BKN48_RS13780 (BKN48_13780) | rapC | 2635878..2637008 (+) | 1131 | WP_070548671.1 | response regulator aspartate phosphatase RapH | Regulator |
| BKN48_RS13785 (BKN48_13785) | phrH | 2636998..2637171 (+) | 174 | WP_032726704.1 | phosphatase RapH inhibitor PhrH | - |
| BKN48_RS13790 (BKN48_13790) | yeeI | 2637331..2638050 (+) | 720 | WP_003233863.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| BKN48_RS13795 (BKN48_13795) | - | 2638183..2638602 (+) | 420 | WP_070548672.1 | spore coat protein | - |
| BKN48_RS13800 (BKN48_13800) | yezE | 2638716..2639300 (+) | 585 | WP_032726702.1 | TetR/AcrR family transcriptional regulator | - |
| BKN48_RS13805 (BKN48_13805) | yesE | 2639380..2639823 (+) | 444 | WP_038828344.1 | nuclear transport factor 2 family protein | - |
| BKN48_RS13810 (BKN48_13810) | yesF | 2639820..2640688 (+) | 869 | Protein_2680 | NAD-dependent epimerase/dehydratase family protein | - |
| BKN48_RS13815 (BKN48_13815) | cotJA | 2640815..2641063 (+) | 249 | WP_003219489.1 | spore coat-associated protein CotJA | - |
| BKN48_RS13820 (BKN48_13820) | cotJB | 2641047..2641310 (+) | 264 | WP_003219491.1 | spore coat protein CotJB | - |
| BKN48_RS13825 (BKN48_13825) | cotJC | 2641325..2641894 (+) | 570 | WP_003233850.1 | spore coat protein CotJC | - |
Sequence
Protein
Download Length: 376 a.a. Molecular weight: 44047.27 Da Isoelectric Point: 5.8846
>NTDB_id=170655 BKN48_RS13780 WP_070548671.1 2635878..2637008(+) (rapC) [Bacillus subtilis strain VV2]
MSQAIPSSRVGVKINEWYKMIRQFSVPDAEILKAEVEQDIQQMEEDQDLLIYYSLMCFRHQLMLDYLEPGQTYGNRPTVT
ELLETIETPQKKLTGLLKYYSFFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDEIEKAEFHFKVAEAYYHMKQTHVSMH
HILQALDIYQNNPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLETALKLATDIQNDRFIAISLLNIANSYDRSGDDQMAV
EHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDL
LSYFEKKNLHAYIEACSRSAATVFESSCHFEQAAAFYRKVLKAQEDILKGECLYAY
MSQAIPSSRVGVKINEWYKMIRQFSVPDAEILKAEVEQDIQQMEEDQDLLIYYSLMCFRHQLMLDYLEPGQTYGNRPTVT
ELLETIETPQKKLTGLLKYYSFFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDEIEKAEFHFKVAEAYYHMKQTHVSMH
HILQALDIYQNNPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLETALKLATDIQNDRFIAISLLNIANSYDRSGDDQMAV
EHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDL
LSYFEKKNLHAYIEACSRSAATVFESSCHFEQAAAFYRKVLKAQEDILKGECLYAY
Nucleotide
Download Length: 1131 bp
>NTDB_id=170655 BKN48_RS13780 WP_070548671.1 2635878..2637008(+) (rapC) [Bacillus subtilis strain VV2]
TTGAGTCAAGCCATACCGTCTTCGCGTGTTGGTGTTAAGATTAATGAATGGTATAAAATGATTCGCCAGTTCAGTGTTCC
GGATGCTGAGATTCTGAAAGCGGAGGTGGAGCAGGACATTCAGCAGATGGAAGAAGACCAGGATTTGCTGATCTATTATT
CTCTGATGTGTTTTCGTCACCAGCTGATGCTTGATTATTTGGAGCCGGGACAAACATACGGGAATCGCCCTACAGTGACA
GAGCTTCTTGAAACGATTGAGACCCCTCAGAAAAAACTCACAGGCCTTTTGAAATACTACTCTTTTTTTTTCCGCGGCAT
GTATGAATTTGATCAAAAAGAATATGTGGAAGCGATCGGGTATTATCGCGAGGCGGAGAAAGAACTGCCGTTTGTGTCAG
ATGAAATTGAGAAAGCGGAATTCCATTTTAAAGTGGCCGAAGCGTATTATCACATGAAGCAAACCCATGTGTCGATGCAT
CATATTCTTCAAGCCTTAGACATTTATCAAAACAATCCCCTATACAGCATTAGAACGATACAAAGCTTGTTTGTGATCGC
CGGCAATTATGATGATTTCAAACATTATGATAAAGCGCTCCCGCATTTAGAGACGGCGCTCAAATTGGCAACGGACATTC
AAAACGATCGGTTTATCGCCATTTCTCTATTGAACATTGCAAACAGCTATGACAGATCAGGAGACGATCAGATGGCTGTA
GAACATTTCCAAAAAGCGGCGAAAGTAAGCAGAGAGAAAGTCCCTGATCTGCTTCCGAAAGTCTTGTTTGGGTTAAGCTG
GACATTATGTAAAGCGGGCCAAACACAGAAGGCGTTTCAGTTCATAGAGGAAGGATTAGACCATATCACAGCACGTTCTC
ACAAATTTTATAAAGAATTGTTTCTGTTCTTGCAGGCCGTGTACAAGGAGACTGTTGATGAACGCAAAATTCATGATCTT
TTAAGCTATTTCGAAAAAAAGAACCTGCACGCGTACATTGAAGCATGTTCCCGGAGTGCTGCCACTGTTTTTGAAAGCAG
CTGTCACTTTGAACAAGCCGCTGCGTTTTATCGGAAAGTGCTGAAAGCCCAAGAAGATATTCTAAAAGGAGAGTGTTTAT
ATGCCTATTAA
TTGAGTCAAGCCATACCGTCTTCGCGTGTTGGTGTTAAGATTAATGAATGGTATAAAATGATTCGCCAGTTCAGTGTTCC
GGATGCTGAGATTCTGAAAGCGGAGGTGGAGCAGGACATTCAGCAGATGGAAGAAGACCAGGATTTGCTGATCTATTATT
CTCTGATGTGTTTTCGTCACCAGCTGATGCTTGATTATTTGGAGCCGGGACAAACATACGGGAATCGCCCTACAGTGACA
GAGCTTCTTGAAACGATTGAGACCCCTCAGAAAAAACTCACAGGCCTTTTGAAATACTACTCTTTTTTTTTCCGCGGCAT
GTATGAATTTGATCAAAAAGAATATGTGGAAGCGATCGGGTATTATCGCGAGGCGGAGAAAGAACTGCCGTTTGTGTCAG
ATGAAATTGAGAAAGCGGAATTCCATTTTAAAGTGGCCGAAGCGTATTATCACATGAAGCAAACCCATGTGTCGATGCAT
CATATTCTTCAAGCCTTAGACATTTATCAAAACAATCCCCTATACAGCATTAGAACGATACAAAGCTTGTTTGTGATCGC
CGGCAATTATGATGATTTCAAACATTATGATAAAGCGCTCCCGCATTTAGAGACGGCGCTCAAATTGGCAACGGACATTC
AAAACGATCGGTTTATCGCCATTTCTCTATTGAACATTGCAAACAGCTATGACAGATCAGGAGACGATCAGATGGCTGTA
GAACATTTCCAAAAAGCGGCGAAAGTAAGCAGAGAGAAAGTCCCTGATCTGCTTCCGAAAGTCTTGTTTGGGTTAAGCTG
GACATTATGTAAAGCGGGCCAAACACAGAAGGCGTTTCAGTTCATAGAGGAAGGATTAGACCATATCACAGCACGTTCTC
ACAAATTTTATAAAGAATTGTTTCTGTTCTTGCAGGCCGTGTACAAGGAGACTGTTGATGAACGCAAAATTCATGATCTT
TTAAGCTATTTCGAAAAAAAGAACCTGCACGCGTACATTGAAGCATGTTCCCGGAGTGCTGCCACTGTTTTTGAAAGCAG
CTGTCACTTTGAACAAGCCGCTGCGTTTTATCGGAAAGTGCTGAAAGCCCAAGAAGATATTCTAAAAGGAGAGTGTTTAT
ATGCCTATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
40.426 |
100 |
0.404 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
39.523 |
100 |
0.396 |