Detailed information NTG0170641

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: BKN48_RS11705
• Genome accession: NZ_CP017676
• Coordinates: 2208929..2210050 (+)
• Length: 373 a.a.
• NCBI ID: WP_070548483.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain VV2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2203929..2215050

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BKN48_RS11685 (BKN48_11685)	ycdA	2203934..2204998 (-)	1065	WP_070548478.1	DUF4352 domain-containing protein	-
BKN48_RS21210	-	2205021..2205152 (-)	132	WP_003246334.1	hypothetical protein	-
BKN48_RS11690 (BKN48_11690)	ycdB	2205326..2206747 (+)	1422	WP_070548479.1	YcdB/YcdC domain-containing protein	-
BKN48_RS11695 (BKN48_11695)	ycdC	2206934..2208295 (+)	1362	WP_070549237.1	YcdB/YcdC domain-containing protein	-
BKN48_RS11700 (BKN48_11700)	cwlK	2208303..2208806 (-)	504	WP_070548482.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
BKN48_RS11705 (BKN48_11705)	rapF	2208929..2210050 (+)	1122	WP_070548483.1	response regulator aspartate phosphatase RapJ	Regulator
BKN48_RS11710 (BKN48_11710)	ycdF	2210158..2210934 (+)	777	WP_003234739.1	SDR family oxidoreductase	-
BKN48_RS11715 (BKN48_11715)	ycdG	2210959..2212644 (+)	1686	WP_070548485.1	glycoside hydrolase family 13 protein	-
BKN48_RS11720 (BKN48_11720)	znuA	2212832..2213791 (+)	960	WP_029317219.1	metal ABC transporter substrate-binding protein	-
BKN48_RS11725 (BKN48_11725)	znuC	2213846..2214541 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44374.26 Da
• Isoelectric Point: 4.7838

>NTDB_id=170641 BKN48_RS11705 WP_070548483.1 2208929..2210050(+) (rapF) [Bacillus subtilis strain VV2]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFCLIHELYLGNGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=170641 BKN48_RS11705 WP_070548483.1 2208929..2210050(+) (rapF) [Bacillus subtilis strain VV2]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTACTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATTAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAAGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTTTGCCTCATTCATGAGCTGTATCTTGGAAACGGTGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCAGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405