Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   BKN48_RS10270 Genome accession   NZ_CP017676
Coordinates   1949626..1950453 (+) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis strain VV2     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1944626..1955453
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BKN48_RS10245 (BKN48_10245) efpO 1945689..1947131 (+) 1443 WP_070548340.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  BKN48_RS10250 (BKN48_10250) tmk 1947128..1947766 (+) 639 WP_069322312.1 dTMP kinase -
  BKN48_RS10255 (BKN48_10255) darA 1947840..1948169 (+) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  BKN48_RS10260 (BKN48_10260) yaaR 1948182..1948622 (+) 441 WP_009966249.1 YaaR family protein -
  BKN48_RS10265 (BKN48_10265) holB 1948634..1949623 (+) 990 WP_003226770.1 DNA polymerase III subunit delta' -
  BKN48_RS10270 (BKN48_10270) yaaT 1949626..1950453 (+) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  BKN48_RS10275 (BKN48_10275) yabA 1950468..1950827 (+) 360 WP_003218308.1 replication initiation-control protein YabA -
  BKN48_RS10280 (BKN48_10280) trmNF 1950886..1951629 (+) 744 WP_070548342.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  BKN48_RS10285 (BKN48_10285) yazA 1951616..1951915 (+) 300 WP_003242983.1 GIY-YIG nuclease family protein -
  BKN48_RS10290 (BKN48_10290) rsmI 1951890..1952768 (+) 879 WP_070548344.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  BKN48_RS10295 (BKN48_10295) abrB 1952817..1953107 (-) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=170633 BKN48_RS10270 WP_003226767.1 1949626..1950453(+) (yaaT) [Bacillus subtilis strain VV2]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=170633 BKN48_RS10270 WP_003226767.1 1949626..1950453(+) (yaaT) [Bacillus subtilis strain VV2]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996

Multiple sequence alignment