Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   BKN48_RS10000 Genome accession   NZ_CP017676
Coordinates   1898059..1898907 (-) Length   282 a.a.
NCBI ID   WP_003226832.1    Uniprot ID   P26497
Organism   Bacillus subtilis strain VV2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1893059..1903907
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BKN48_RS09980 (BKN48_09980) yyaE 1893570..1895573 (-) 2004 WP_070548336.1 molybdopterin-dependent oxidoreductase -
  BKN48_RS09985 (BKN48_09985) yyzM 1895624..1895830 (-) 207 WP_003226838.1 DUF951 domain-containing protein -
  BKN48_RS09990 (BKN48_09990) - 1895924..1896940 (-) 1017 WP_010886647.1 membrane protein -
  BKN48_RS09995 (BKN48_09995) yyaC 1897403..1898020 (+) 618 WP_003226834.1 spore protease YyaC -
  BKN48_RS10000 (BKN48_10000) spo0J 1898059..1898907 (-) 849 WP_003226832.1 stage 0 sporulation protein Spo0J Regulator
  BKN48_RS10005 (BKN48_10005) soj 1898900..1899661 (-) 762 WP_003219244.1 sporulation initiation inhibitor protein Soj -
  BKN48_RS10010 (BKN48_10010) yyaB 1899909..1900349 (+) 441 WP_015250779.1 PH domain-containing protein -
  BKN48_RS10015 (BKN48_10015) noc 1900400..1901251 (-) 852 WP_003226829.1 nucleoid occlusion protein -
  BKN48_RS10020 (BKN48_10020) rsmG 1901373..1902092 (-) 720 WP_015250777.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -

Sequence

Protein


Download         Length: 282 a.a.        Molecular weight: 32210.16 Da        Isoelectric Point: 8.3881

>NTDB_id=170630 BKN48_RS10000 WP_003226832.1 1898059..1898907(-) (spo0J) [Bacillus subtilis strain VV2]
MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELKESVLQHGILQPLIVRKSLKGYDIVAGERR
FRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLT
LPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESY
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES

Nucleotide


Download         Length: 849 bp        

>NTDB_id=170630 BKN48_RS10000 WP_003226832.1 1898059..1898907(-) (spo0J) [Bacillus subtilis strain VV2]
ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTAGATTTGTCTGAAGAGACAGTTGAAGAAATTAA
AATTGCCGATTTACGCCCTAATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAACTAAAAGAATCTG
TGTTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAAATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGT
TTTCGAGCGGCAAAGCTGGCAGGTTTAGATACAGTTCCGGCCATTGTCCGTGAATTATCAGAGGCGTTAATGAGGGAAAT
TGCTTTATTAGAAAACCTTCAGCGTGAAGATCTATCTCCGCTTGAAGAGGCTCAGGCATATGACTCCTTGCTGAAACACT
TAGATCTCACGCAAGAGCAGCTTGCCAAACGTCTTGGAAAAAGCAGACCGCATATTGCGAATCATTTAAGACTGCTGACA
CTGCCAGAAAATATTCAGCAGCTTATTGCCGAAGGTACGCTTTCTATGGGACATGGACGCACGCTTCTTGGCTTAAAAAA
CAAAAATAAGCTTGAACCGCTGGTACAAAAAGTGATTGCGGAGCAGCTCAATGTTCGCCAGCTTGAGCAGCTGATTCAGC
AGTTGAATCAGAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTGAAAGATGCGGTTCTAAAAGAACGAGAATCCTAT
CTCCAAAATTATTTTGGAACAACAGTTAATATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA
TGAAGACCTTGACCGGATTTTAGAGCTTTTGTCTGAACGAGAATCATAA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(163-214)

ParB/Sulfiredoxin domain (ParB_N)

(24-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 5NOC
  PDB 6SDK

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.923

92.199

0.387