Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   BKN48_RS06725 Genome accession   NZ_CP017676
Coordinates   1253141..1253854 (-) Length   237 a.a.
NCBI ID   WP_021480675.1    Uniprot ID   -
Organism   Bacillus subtilis strain VV2     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1248141..1258854
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BKN48_RS06705 (BKN48_06705) ghrB 1248286..1249263 (+) 978 WP_080481213.1 2-hydroxyacid dehydrogenase -
  BKN48_RS06710 (BKN48_06710) psdB 1249300..1251240 (-) 1941 WP_024571588.1 lantibiotic ABC transporter permease PsdB -
  BKN48_RS06715 (BKN48_06715) psdA 1251215..1251994 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  BKN48_RS06720 (BKN48_06720) psdS 1252077..1253147 (-) 1071 WP_070547826.1 two-component sensor histidine kinase PsdS -
  BKN48_RS06725 (BKN48_06725) braR 1253141..1253854 (-) 714 WP_021480675.1 two-component system response regulator PsdR Regulator
  BKN48_RS06730 (BKN48_06730) - 1254001..1254210 (+) 210 WP_021480676.1 hypothetical protein -
  BKN48_RS06735 (BKN48_06735) yvcN 1254246..1255010 (-) 765 WP_080286260.1 arylamine N-acetyltransferase family protein -
  BKN48_RS06740 (BKN48_06740) crh 1255011..1255268 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  BKN48_RS06745 (BKN48_06745) whiA 1255292..1256242 (-) 951 WP_003228147.1 DNA-binding protein WhiA -
  BKN48_RS06750 (BKN48_06750) mgfK 1256265..1257218 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  BKN48_RS06755 (BKN48_06755) rapZ 1257220..1258107 (-) 888 WP_003228143.1 RNase adapter RapZ -
  BKN48_RS06760 (BKN48_06760) rppI 1258132..1258608 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27544.41 Da        Isoelectric Point: 4.6062

>NTDB_id=170611 BKN48_RS06725 WP_021480675.1 1253141..1253854(-) (braR) [Bacillus subtilis strain VV2]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNTPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=170611 BKN48_RS06725 WP_021480675.1 1253141..1253854(-) (braR) [Bacillus subtilis strain VV2]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGACCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATACGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCAAGAATAG
TGGAGCTTGGCGGGCTAACGATTTATCCTGATCAAAATGAAGCGGAGTGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAATCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43