Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   BKN48_RS04385 Genome accession   NZ_CP017676
Coordinates   801954..802649 (-) Length   231 a.a.
NCBI ID   WP_070547660.1    Uniprot ID   -
Organism   Bacillus subtilis strain VV2     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 796954..807649
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BKN48_RS04365 (BKN48_04365) - 797381..798127 (+) 747 WP_070547657.1 hypothetical protein -
  BKN48_RS04370 (BKN48_04370) bceB 798164..800104 (-) 1941 WP_070547658.1 bacitracin ABC transporter permease BceB -
  BKN48_RS04375 (BKN48_04375) bceA 800094..800855 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  BKN48_RS04380 (BKN48_04380) bceS 800957..801961 (-) 1005 WP_070547659.1 two-component sensor histidine kinase BceS -
  BKN48_RS04385 (BKN48_04385) braR 801954..802649 (-) 696 WP_070547660.1 two-component response regulator BceR Regulator
  BKN48_RS04390 (BKN48_04390) ytrF 802746..804056 (-) 1311 WP_015251399.1 ABC transporter permease YtrF -
  BKN48_RS04395 (BKN48_04395) ytrE 804046..804741 (-) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  BKN48_RS04400 (BKN48_04400) ytrD 804756..805733 (-) 978 WP_070547661.1 ABC transporter permease YtrD -
  BKN48_RS04405 (BKN48_04405) - 805765..806751 (-) 987 WP_070547662.1 ABC transporter permease subunit -
  BKN48_RS04410 (BKN48_04410) ytrB 806745..807623 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26909.77 Da        Isoelectric Point: 5.3731

>NTDB_id=170600 BKN48_RS04385 WP_070547660.1 801954..802649(-) (braR) [Bacillus subtilis strain VV2]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRQIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDVLQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=170600 BKN48_RS04385 WP_070547660.1 801954..802649(-) (braR) [Bacillus subtilis strain VV2]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCAGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATCCAAAAGCCATTTCATTTTGATGT
GCTGATTGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAGATGTTCATT
CTTAAACAACTAATAGAGCAAAAAAACAAGATCGTCAGCCGTGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGTCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377