Detailed information NTG0170551

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: AXW77_RS05640
• Genome accession: NZ_CP014344
• Coordinates: 1081270..1082229 (+)
• Length: 319 a.a.
• NCBI ID: WP_032586265.1
• Uniprot ID: A0A5Y8BL20
• Organism: Campylobacter jejuni strain RM3194 voucher USDA:NWG_RM3194-1
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1076270..1087229

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AXW77_RS05615 (AXW77_05615)	neuC	1076860..1077984 (+)	1125	WP_002859249.1	UDP-N-acetylglucosamine 2-epimerase	-
AXW77_RS09570 (AXW77_05620)	-	1077977..1078924 (+)	948	Protein_1078	beta-1,4-N-acetylgalactosaminyltransferase	-
AXW77_RS05625 (AXW77_05625)	-	1078921..1079586 (+)	666	WP_002935341.1	acylneuraminate cytidylyltransferase family protein	-
AXW77_RS05630 (AXW77_05630)	-	1079710..1080459 (+)	750	WP_061099817.1	CatB-related O-acetyltransferase	-
AXW77_RS05635 (AXW77_05635)	waaV	1080399..1081211 (-)	813	WP_002935342.1	glycosyltransferase family 2 protein	-
AXW77_RS05640 (AXW77_05640)	waaF	1081270..1082229 (+)	960	WP_032586265.1	glycosyltransferase family 9 protein	Regulator
AXW77_RS05645 (AXW77_05645)	gmhA	1082210..1082770 (-)	561	WP_023890815.1	D-sedoheptulose 7-phosphate isomerase	-
AXW77_RS05650 (AXW77_05650)	rfaE1	1082767..1084152 (-)	1386	WP_032586263.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
AXW77_RS05655 (AXW77_05655)	rfaD	1084145..1085098 (-)	954	WP_002860242.1	ADP-glyceromanno-heptose 6-epimerase	-
AXW77_RS05660 (AXW77_05660)	gmhB	1085115..1085661 (-)	547	Protein_1086	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
AXW77_RS05665 (AXW77_05665)	-	1085742..1086044 (+)	303	WP_002852762.1	cytochrome c	-
AXW77_RS05670 (AXW77_05670)	ccoS	1086067..1086273 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36740.49 Da
• Isoelectric Point: 10.3923

>NTDB_id=170551 AXW77_RS05640 WP_032586265.1 1081270..1082229(+) (waaF) [Campylobacter jejuni strain RM3194 voucher USDA:NWG_RM3194-1]
MKIFIHLPTWLGDAVMASLALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGINPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKVEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKICPLKHHKCMKDLKPKRVIEEARNLLKNPHL

Nucleotide

• Length: 960 bp

>NTDB_id=170551 AXW77_RS05640 WP_032586265.1 1081270..1082229(+) (waaF) [Campylobacter jejuni strain RM3194 voucher USDA:NWG_RM3194-1]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACTTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGAATCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTAGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGTCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATTGCTTTTTGTGATCTTTTCATAACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTAAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

3D structure

• AlphaFold DB: A0A5Y8BL20

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.044	100	0.94