Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | AXW77_RS05300 | Genome accession | NZ_CP014344 |
| Coordinates | 1012776..1013078 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain RM3194 voucher USDA:NWG_RM3194-1 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1007776..1018078
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AXW77_RS05275 (AXW77_05275) | rpsR | 1008141..1008401 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| AXW77_RS05280 (AXW77_05280) | lon | 1008461..1010836 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| AXW77_RS05285 (AXW77_05285) | - | 1010853..1011500 (-) | 648 | WP_061099812.1 | outer membrane protein assembly factor BamD | - |
| AXW77_RS05290 (AXW77_05290) | fliW | 1011659..1012048 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| AXW77_RS05295 (AXW77_05295) | proC | 1012048..1012779 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| AXW77_RS05300 (AXW77_05300) | ctsT | 1012776..1013078 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| AXW77_RS05305 (AXW77_05305) | - | 1013075..1013737 (+) | 663 | WP_002859149.1 | hypothetical protein | - |
| AXW77_RS05310 (AXW77_05310) | - | 1013734..1014186 (+) | 453 | WP_002874062.1 | hypothetical protein | - |
| AXW77_RS05315 (AXW77_05315) | hemD | 1014183..1014812 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| AXW77_RS05320 (AXW77_05320) | thiE | 1014790..1015422 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| AXW77_RS05325 (AXW77_05325) | thiD | 1015412..1016224 (-) | 813 | WP_061099879.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AXW77_RS05330 (AXW77_05330) | - | 1016221..1016907 (-) | 687 | WP_002868632.1 | endonuclease III domain-containing protein | - |
| AXW77_RS05335 (AXW77_05335) | - | 1016904..1017665 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=170549 AXW77_RS05300 WP_002853046.1 1012776..1013078(+) (ctsT) [Campylobacter jejuni strain RM3194 voucher USDA:NWG_RM3194-1]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=170549 AXW77_RS05300 WP_002853046.1 1012776..1013078(+) (ctsT) [Campylobacter jejuni strain RM3194 voucher USDA:NWG_RM3194-1]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |