Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   BKM67_RS06820 Genome accession   NZ_CP017667
Coordinates   1365280..1365762 (+) Length   160 a.a.
NCBI ID   WP_024400725.1    Uniprot ID   -
Organism   Streptococcus suis strain 1081     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1360280..1370762
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BKM67_RS06790 (BKM67_06640) - 1360309..1361457 (+) 1149 WP_105183917.1 cobalamin-independent methionine synthase II family protein -
  BKM67_RS06795 (BKM67_06645) - 1361528..1362838 (-) 1311 WP_105183918.1 GntP family permease -
  BKM67_RS06800 (BKM67_06650) folK 1362889..1363377 (-) 489 WP_105183919.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  BKM67_RS06805 (BKM67_06655) folB 1363374..1363736 (-) 363 WP_024400723.1 dihydroneopterin aldolase -
  BKM67_RS06810 (BKM67_06660) folP 1363729..1364541 (-) 813 WP_105127373.1 dihydropteroate synthase -
  BKM67_RS06815 (BKM67_06665) folE 1364550..1365113 (-) 564 WP_002938082.1 GTP cyclohydrolase I FolE -
  BKM67_RS06820 (BKM67_06670) mutX 1365280..1365762 (+) 483 WP_024400725.1 8-oxo-dGTP diphosphatase Machinery gene
  BKM67_RS06825 (BKM67_06675) - 1365805..1366482 (-) 678 WP_024407416.1 DUF4956 domain-containing protein -
  BKM67_RS06830 (BKM67_06680) - 1366469..1367212 (-) 744 WP_105183920.1 polyphosphate polymerase domain-containing protein -
  BKM67_RS06835 (BKM67_06685) - 1367405..1367707 (+) 303 WP_029171211.1 hypothetical protein -
  BKM67_RS06840 (BKM67_06690) - 1367728..1367994 (-) 267 WP_024407417.1 DUF2087 domain-containing protein -
  BKM67_RS06845 (BKM67_06695) pheT 1368049..1370448 (-) 2400 WP_029171213.1 phenylalanine--tRNA ligase subunit beta -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18440.77 Da        Isoelectric Point: 4.5422

>NTDB_id=170445 BKM67_RS06820 WP_024400725.1 1365280..1365762(+) (mutX) [Streptococcus suis strain 1081]
MTKKPVQLATICYIDNGKEFLLLHRNKKENDVHQGKWIGVGGKLEPGETPQACAIREVFEETGLTVTKHALKGVITFPDF
TPNTDWYTYVFKITGFEGSLIDCNEGDLEWVPYDQVLSKPTWEGDRHFQAWLLENKPFFSACFRYDGDSLLDYSVDFYEE

Nucleotide


Download         Length: 483 bp        

>NTDB_id=170445 BKM67_RS06820 WP_024400725.1 1365280..1365762(+) (mutX) [Streptococcus suis strain 1081]
ATGACCAAGAAACCCGTCCAACTCGCTACGATTTGCTACATTGATAATGGTAAGGAATTTCTTCTCCTTCATCGAAACAA
GAAAGAAAATGATGTCCATCAAGGAAAATGGATTGGAGTTGGTGGTAAACTAGAACCTGGCGAAACACCACAGGCTTGTG
CCATTCGAGAAGTCTTTGAGGAAACTGGGCTTACTGTAACAAAGCATGCTCTAAAAGGAGTGATAACCTTCCCAGACTTT
ACTCCAAACACAGACTGGTACACCTATGTCTTTAAGATAACTGGTTTTGAAGGAAGTTTGATCGATTGCAACGAAGGCGA
TTTAGAATGGGTTCCTTATGACCAAGTGCTCTCCAAACCAACTTGGGAAGGCGATCGCCATTTTCAAGCATGGCTATTAG
AGAACAAACCCTTCTTTTCCGCTTGCTTCCGCTATGACGGGGATAGCTTGCTGGATTACAGCGTTGATTTTTATGAGGAG
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(8-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

79.085

95.625

0.756