Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   BKM67_RS01210 Genome accession   NZ_CP017667
Coordinates   220097..222430 (+) Length   777 a.a.
NCBI ID   WP_105184013.1    Uniprot ID   -
Organism   Streptococcus suis strain 1081     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 215097..227430
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BKM67_RS01190 (BKM67_01180) treP 215907..217895 (-) 1989 WP_105184014.1 PTS system trehalose-specific EIIBC component -
  BKM67_RS01195 (BKM67_01185) treR 218129..218842 (+) 714 WP_024406828.1 trehalose operon repressor Regulator
  BKM67_RS01200 (BKM67_01190) - 218900..219211 (+) 312 WP_002935948.1 hypothetical protein -
  BKM67_RS01205 (BKM67_01195) - 219208..219756 (+) 549 WP_002935945.1 CvpA family protein -
  BKM67_RS01210 (BKM67_01200) mutS/mutS2 220097..222430 (+) 2334 WP_105184013.1 endonuclease MutS2 Machinery gene
  BKM67_RS01215 (BKM67_01205) - 222454..223107 (+) 654 WP_074391367.1 GNAT family N-acetyltransferase -
  BKM67_RS01220 (BKM67_01210) trxA 223796..224110 (+) 315 WP_012775426.1 thioredoxin -
  BKM67_RS01225 (BKM67_01215) - 224251..225780 (+) 1530 WP_105184012.1 AMP-binding protein -
  BKM67_RS01230 (BKM67_01220) msrB 225820..226758 (+) 939 WP_105184011.1 peptide-methionine (R)-S-oxide reductase MsrB -

Sequence

Protein


Download         Length: 777 a.a.        Molecular weight: 87629.32 Da        Isoelectric Point: 6.4810

>NTDB_id=170408 BKM67_RS01210 WP_105184013.1 220097..222430(+) (mutS/mutS2) [Streptococcus suis strain 1081]
MNNKIIETLEFHKVRQKIEPYLLTEQGFEELRQLEPMVEVHRIQQAFDELTDIAQIFVENPYFSLSATSDIGPAMRRLEL
DTDLNIAELLAVKKVLEVSKSLLDFYGNLENVSLSQLDKLFEKIELFPHLQGSLQSINDAGFVEDFASEKLARIRRKIRE
AEDQVRQVMQDILKTKGDMLSDSILASRNGRNVLPVKNTYRNKIAGVVHDISASGSTVYIEPRAVVTLNEEISHLRAEER
HELNRILQELSDMLRPHSGVIRNNAWLIGHIDFVRAKHLFARDHQAVVPKLSEKQDIALLNVRHPLIAEPVPNDLYFGSQ
LTAIVITGPNTGGKTIMLKTLGLTHLMAQSGLPILADKGSRVAIFKEIFADIGDEQSIEQSLSTFSSHMTHTVQILAEAD
QDSLILFDELGAGTDPQEGASLAMAILDDLRLRGIKTMATTHYPELKAYGIETSGIENASMEFDSNSLRPTYKFMQGVPG
CSNAFEIARRLGLSDIIIQSAQSWTDTDSDVNRIIEKLESQTVESRQRLDKIRDVEQENYKMNRALRKLYDELNRERENE
LNKARLEAKEIVDMALAESEDILKNLHAVASLKPHQIIEAKAELKKLAPEVVDLSKNKVLKKAKIQREAKVGDDIIVTAY
RQRGTLTNQLKDGRWEAQVGLIKMTLAKDEFELVKAEKAEQPKKRQVHTVKRANVRGPKARLDLRGKRYEEAMMELDEFI
DQALLNNLAQVDIVHGIGTGVIREGVTKYLRRNKQVKEFGYAPQNAGGSGCTIVTFK

Nucleotide


Download         Length: 2334 bp        

>NTDB_id=170408 BKM67_RS01210 WP_105184013.1 220097..222430(+) (mutS/mutS2) [Streptococcus suis strain 1081]
ATGAATAATAAAATTATTGAAACCCTTGAATTTCACAAGGTAAGACAAAAAATTGAGCCCTATCTCTTGACGGAACAGGG
CTTTGAAGAATTACGACAGTTGGAGCCCATGGTGGAAGTCCACCGTATCCAACAGGCCTTCGACGAGTTGACAGACATAG
CGCAGATTTTTGTGGAAAATCCCTATTTCAGTCTGTCAGCTACTAGCGACATCGGTCCAGCCATGCGTCGTTTGGAATTG
GATACAGACCTCAATATCGCTGAGCTATTAGCTGTTAAAAAGGTCTTGGAAGTTTCTAAATCTCTCTTGGATTTTTATGG
AAATCTGGAAAATGTCAGTCTTAGCCAGCTGGATAAACTCTTTGAGAAGATTGAGCTTTTTCCACATTTACAAGGCTCCC
TCCAGTCCATCAATGATGCTGGTTTTGTAGAGGATTTTGCCTCTGAAAAACTAGCCCGTATTCGAAGAAAAATCCGTGAA
GCTGAAGACCAAGTTCGTCAGGTCATGCAGGATATTTTGAAGACCAAGGGCGACATGCTGTCCGATAGCATTTTGGCAAG
TCGTAATGGGCGAAATGTCCTTCCTGTCAAGAATACCTACCGCAATAAGATTGCAGGGGTTGTCCATGACATTTCTGCAT
CTGGCTCGACTGTGTATATTGAACCGCGGGCAGTGGTGACCCTGAACGAAGAAATCAGTCACCTCCGTGCAGAAGAGCGC
CATGAGCTTAACCGTATCTTGCAGGAATTATCGGATATGCTTCGACCTCATAGTGGCGTGATTCGTAACAATGCATGGCT
TATCGGACATATTGATTTCGTCCGTGCTAAGCATCTCTTTGCGCGTGATCATCAAGCAGTTGTACCCAAACTATCTGAGA
AGCAGGATATTGCCCTTCTTAACGTTCGCCATCCGCTCATTGCTGAGCCTGTACCAAATGACCTTTATTTCGGTAGTCAG
TTGACGGCTATCGTGATAACAGGTCCCAACACAGGTGGTAAGACCATCATGCTTAAGACCTTGGGATTGACCCATCTGAT
GGCTCAGTCTGGTTTGCCTATCTTGGCTGACAAGGGCAGTCGGGTAGCTATCTTCAAAGAAATTTTTGCGGATATTGGGG
ATGAACAGTCGATTGAGCAGAGTTTATCAACCTTCTCCAGTCACATGACCCACACGGTACAGATTTTAGCGGAGGCAGAT
CAAGATTCCCTCATTCTCTTTGACGAGTTGGGAGCGGGGACAGATCCGCAGGAGGGTGCGTCTTTGGCAATGGCTATTTT
GGATGACCTTCGTCTGCGGGGGATCAAGACCATGGCAACCACCCACTACCCTGAGCTTAAGGCCTACGGGATAGAAACCT
CTGGTATTGAAAATGCCAGCATGGAATTTGATAGCAATAGCCTGCGTCCGACCTATAAGTTTATGCAGGGTGTTCCTGGT
TGCTCCAATGCCTTTGAAATTGCCCGCCGTCTTGGTCTATCTGATATTATTATCCAGTCAGCCCAATCTTGGACGGATAC
AGATAGCGATGTGAACCGCATTATCGAGAAATTGGAAAGCCAGACGGTTGAAAGTCGTCAGCGTCTGGATAAGATTCGTG
ATGTGGAGCAAGAAAATTACAAGATGAACCGAGCCCTTCGTAAGCTCTATGACGAGCTCAATCGTGAGCGGGAAAATGAG
CTCAACAAGGCACGTTTGGAAGCCAAGGAAATTGTAGATATGGCATTGGCAGAAAGCGAGGACATTCTTAAAAATCTTCA
TGCTGTAGCCAGTCTTAAGCCCCACCAGATTATCGAAGCTAAGGCAGAGCTGAAAAAGTTGGCACCTGAAGTGGTAGATC
TGTCTAAAAACAAGGTTCTGAAAAAAGCTAAAATTCAGCGTGAAGCCAAGGTGGGCGATGACATTATCGTTACAGCTTAT
AGACAACGTGGGACCTTGACCAATCAGCTTAAAGATGGACGTTGGGAAGCTCAGGTTGGCTTGATTAAGATGACCTTGGC
CAAAGATGAGTTTGAGTTAGTCAAGGCGGAAAAGGCAGAGCAGCCTAAGAAACGCCAGGTTCACACAGTCAAACGTGCCA
ATGTACGAGGACCAAAAGCCCGCTTAGATCTCCGTGGCAAACGCTACGAAGAGGCTATGATGGAGCTGGATGAATTTATC
GACCAAGCCCTTCTCAACAATCTGGCACAAGTCGACATTGTCCACGGTATTGGTACAGGGGTTATCCGAGAAGGGGTGAC
AAAGTACCTTCGCCGAAACAAGCAAGTCAAGGAGTTCGGCTACGCCCCACAAAATGCAGGTGGCTCAGGCTGTACTATTG
TGACGTTTAAATAG

Domains

Predicted by InterProScan.

Smr domain (Smr)

(702-777)

MutS2 and Smr-associated SH3 domain (MSSS)

(631-670)

MutS domain V (MutS_V)

(324-504)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.394

100

0.402