Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   AXW78_RS18985 Genome accession   NZ_CP014282
Coordinates   3838995..3839453 (+) Length   152 a.a.
NCBI ID   WP_000804864.1    Uniprot ID   -
Organism   Bacillus thuringiensis strain Bt185     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3833995..3844453
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AXW78_RS18970 (AXW78_18970) - 3834665..3834901 (+) 237 WP_000283738.1 hypothetical protein -
  AXW78_RS18975 (AXW78_18975) - 3835062..3837170 (-) 2109 WP_000423549.1 polyphosphate kinase -
  AXW78_RS18980 (AXW78_18980) ppx 3837279..3838853 (-) 1575 WP_061884526.1 exopolyphosphatase -
  AXW78_RS18985 (AXW78_18985) kre 3838995..3839453 (+) 459 WP_000804864.1 YkyB family protein Regulator
  AXW78_RS18990 (AXW78_18990) - 3839485..3840147 (-) 663 WP_000922485.1 YkyA family protein -
  AXW78_RS18995 (AXW78_18995) - 3840762..3841415 (-) 654 WP_000680819.1 diguanylate cyclase -
  AXW78_RS19000 (AXW78_19000) - 3841579..3841812 (+) 234 WP_000939449.1 SPP1 phage holin family protein -
  AXW78_RS19005 (AXW78_19005) - 3841844..3842344 (-) 501 WP_061884527.1 hypothetical protein -
  AXW78_RS19010 (AXW78_19010) - 3842747..3844288 (+) 1542 WP_000449907.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17757.49 Da        Isoelectric Point: 10.6793

>NTDB_id=170196 AXW78_RS18985 WP_000804864.1 3838995..3839453(+) (kre) [Bacillus thuringiensis strain Bt185]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=170196 AXW78_RS18985 WP_000804864.1 3838995..3839453(+) (kre) [Bacillus thuringiensis strain Bt185]
ATGAAACCTTCACAACCACAATCTCAATTACAAAATCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCAGCTACTAATCCTAAATATTTATACTGGTTAAAAAAGACAGCTTTAGAACGTTTGATTGCTGAAA
AAAAAGCAATTAAAGAAGGATTACATTTTTCTAGAAACCCACGTTTTAGCCAACAACAATCTGATGTCCTTATACGTTTA
GGCGATTATTTTTTCCACATCCCTCCTACGAAAGAAGATTTTCGAATTCTACCGCATCTTGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCATTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCATTAAAAC
AAGAAAAAAAATTAAGTGAACCTGTTCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493

Multiple sequence alignment