Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   AXE83_RS01315 Genome accession   NZ_CP014264
Coordinates   254745..256505 (+) Length   586 a.a.
NCBI ID   WP_060955135.1    Uniprot ID   -
Organism   Streptococcus sp. oral taxon 431 strain F0610 (5-114)     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 249745..261505
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AXE83_RS01295 (AXE83_01295) - 250720..251436 (+) 717 WP_045762594.1 YebC/PmpR family DNA-binding transcriptional regulator -
  AXE83_RS01300 (AXE83_01300) - 251659..252333 (-) 675 WP_060955132.1 hypothetical protein -
  AXE83_RS01305 (AXE83_01305) - 252541..253002 (+) 462 WP_060955133.1 MarR family winged helix-turn-helix transcriptional regulator -
  AXE83_RS01310 (AXE83_01310) rcrP 252986..254755 (+) 1770 WP_060955134.1 ABC transporter ATP-binding protein Regulator
  AXE83_RS01315 (AXE83_01315) rcrQ 254745..256505 (+) 1761 WP_060955135.1 ABC transporter ATP-binding protein Regulator
  AXE83_RS01320 (AXE83_01320) - 256570..256876 (+) 307 Protein_256 DUF2200 family protein -
  AXE83_RS01325 (AXE83_01325) - 256879..257382 (+) 504 WP_060955136.1 phosphatase PAP2 family protein -
  AXE83_RS01330 (AXE83_01330) - 257501..257947 (+) 447 WP_000776599.1 LytTR family DNA-binding domain-containing protein -
  AXE83_RS01335 (AXE83_01335) - 257952..258626 (+) 675 WP_060955137.1 hypothetical protein -
  AXE83_RS01340 (AXE83_01340) rpmB 258733..258921 (+) 189 WP_001140948.1 50S ribosomal protein L28 -
  AXE83_RS01345 (AXE83_01345) - 259072..259437 (+) 366 WP_000216431.1 Asp23/Gls24 family envelope stress response protein -
  AXE83_RS01350 (AXE83_01350) - 259440..261107 (+) 1668 WP_060955138.1 DAK2 domain-containing protein -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 64565.36 Da        Isoelectric Point: 4.9677

>NTDB_id=169979 AXE83_RS01315 WP_060955135.1 254745..256505(+) (rcrQ) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
MENKKMSLWKQCRPFLAGLQLPLLVAVVAAICSSIITVYGPTKIKEITNLISDGLMTEIDLEAVSSIASFLVILYVLGII
LNYTQAYIFSTSIQHFSKRLRTAIAEKINRLPLAYFDRHSQGDTLSRVTNDVDTAAQSLNQSLGTVLSAGFLLIAVLITM
FGMNWILALVTVVSTLVGFAAVSVIMAKSQGYFKAQQNSLAAVNGYVEEMYSGHNVVTSYNAVEPTKDTFAGLNQNLHDS
IWKSQFISGIMMPAMVFVGNFSYVLVIIVGAALALEGYISIGIIVAFMVYVRTFSQPLSQIAQGITSLQQASAAMTRVFE
FLGEAEMEDESHKERQLTDMKGQVVFDRVAFGYTPEKTIIHDFSATAHAGQKVAIVGPTGAGKTTIVNLLMKFYEIDKGS
IRIDGVDTKNMKRSEVHDAFSMVLQDTWLFEGTIRDNLIYNQTGISEERVIEAAKAVGIHHFITTLPDGYDTVLDDTVTL
SVGQKQLLTIARALLKDSPLLILDEATSSVDTRTEELIQKAMDRLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGN
HEELMAQGGFYADLYNSQFTEDEVEE

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=169979 AXE83_RS01315 WP_060955135.1 254745..256505(+) (rcrQ) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
ATGGAAAATAAGAAAATGTCCTTATGGAAACAGTGTAGACCTTTTCTAGCAGGTCTCCAACTTCCTCTACTAGTCGCAGT
TGTGGCGGCTATCTGTTCAAGTATTATCACGGTTTATGGACCGACTAAGATCAAAGAAATTACCAATTTGATTTCAGATG
GGTTAATGACAGAGATTGACCTAGAGGCTGTCTCAAGTATTGCTAGCTTTTTGGTTATCCTCTATGTGCTTGGGATTATC
CTGAACTATACGCAAGCTTACATTTTTTCAACTAGTATCCAACATTTCTCAAAACGTTTGCGGACAGCTATTGCTGAGAA
AATCAATCGCTTGCCACTTGCTTATTTTGACCGTCATTCTCAAGGGGACACCCTTTCTCGTGTGACTAATGACGTTGATA
CAGCAGCTCAGTCTCTTAACCAAAGCCTTGGGACAGTTCTTTCAGCTGGCTTTTTACTGATTGCTGTTTTGATTACTATG
TTTGGTATGAACTGGATTTTGGCACTGGTAACCGTTGTTTCAACCCTTGTTGGATTTGCGGCGGTTTCCGTAATTATGGC
CAAGTCGCAGGGCTACTTTAAAGCTCAACAAAATAGCCTAGCAGCTGTAAATGGCTATGTGGAAGAAATGTACTCTGGCC
ACAATGTGGTGACCAGCTATAATGCTGTTGAACCAACAAAAGATACATTTGCAGGTTTGAATCAGAATCTACATGATAGC
ATCTGGAAATCTCAGTTTATCTCTGGAATTATGATGCCTGCCATGGTCTTTGTAGGCAACTTTAGTTATGTTCTAGTCAT
TATCGTCGGTGCTGCCTTGGCTCTTGAAGGGTATATCAGTATCGGGATTATTGTAGCCTTCATGGTTTATGTTCGAACCT
TCTCGCAACCCTTATCACAGATTGCACAAGGGATTACCAGCTTACAACAGGCTAGTGCAGCTATGACCCGTGTCTTTGAG
TTTCTAGGAGAAGCTGAGATGGAAGACGAGTCTCATAAGGAAAGACAATTAACCGACATGAAGGGTCAAGTGGTCTTTGA
CAGAGTTGCCTTTGGCTATACTCCTGAAAAAACGATCATTCACGACTTTTCAGCGACAGCTCATGCAGGGCAAAAGGTTG
CTATTGTTGGGCCGACTGGAGCTGGGAAAACTACCATAGTCAATCTCTTGATGAAATTTTATGAGATTGATAAGGGAAGC
ATTCGCATCGATGGTGTGGATACCAAGAATATGAAACGCTCGGAAGTGCATGATGCCTTTTCAATGGTCTTGCAGGATAC
CTGGCTCTTTGAAGGAACTATTCGAGACAATCTCATTTATAATCAAACTGGGATTAGTGAAGAGCGCGTGATTGAAGCAG
CCAAAGCAGTAGGAATCCACCACTTTATCACAACCTTACCAGATGGCTACGATACTGTTTTGGATGATACAGTGACCTTG
TCAGTCGGGCAGAAACAGCTCTTGACCATCGCTCGTGCCCTTCTCAAAGATTCTCCACTCTTGATTCTGGACGAAGCGAC
CTCTTCAGTCGATACACGTACAGAGGAGTTGATTCAGAAAGCCATGGACCGTTTGATGGAGGGACGCACATCCTTTGTTA
TTGCCCACCGCTTGTCAACGATCCGCAATGCTGACTTGATTCTGGTCATGAAGGACGGAAACATCATCGAGCAAGGCAAT
CATGAAGAGCTTATGGCTCAAGGTGGTTTCTATGCTGACCTCTACAATAGTCAATTTACAGAAGATGAAGTAGAAGAATA
A

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(23-298)

ABC transporter (ABC_tran)

(361-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

66.838

99.317

0.664

Multiple sequence alignment