Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   AXE83_RS01310 Genome accession   NZ_CP014264
Coordinates   252986..254755 (+) Length   589 a.a.
NCBI ID   WP_060955134.1    Uniprot ID   A0A0X8JWN3
Organism   Streptococcus sp. oral taxon 431 strain F0610 (5-114)     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 247986..259755
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AXE83_RS01280 (AXE83_01280) - 248041..248235 (+) 195 WP_060955129.1 PspC domain-containing protein -
  AXE83_RS01285 (AXE83_01285) - 248589..249143 (-) 555 WP_060955130.1 GNAT family N-acetyltransferase -
  AXE83_RS01290 (AXE83_01290) - 249253..250623 (+) 1371 WP_060955131.1 MATE family efflux transporter -
  AXE83_RS01295 (AXE83_01295) - 250720..251436 (+) 717 WP_045762594.1 YebC/PmpR family DNA-binding transcriptional regulator -
  AXE83_RS01300 (AXE83_01300) - 251659..252333 (-) 675 WP_060955132.1 hypothetical protein -
  AXE83_RS01305 (AXE83_01305) - 252541..253002 (+) 462 WP_060955133.1 MarR family winged helix-turn-helix transcriptional regulator -
  AXE83_RS01310 (AXE83_01310) rcrP 252986..254755 (+) 1770 WP_060955134.1 ABC transporter ATP-binding protein Regulator
  AXE83_RS01315 (AXE83_01315) rcrQ 254745..256505 (+) 1761 WP_060955135.1 ABC transporter ATP-binding protein Regulator
  AXE83_RS01320 (AXE83_01320) - 256570..256876 (+) 307 Protein_256 DUF2200 family protein -
  AXE83_RS01325 (AXE83_01325) - 256879..257382 (+) 504 WP_060955136.1 phosphatase PAP2 family protein -
  AXE83_RS01330 (AXE83_01330) - 257501..257947 (+) 447 WP_000776599.1 LytTR family DNA-binding domain-containing protein -
  AXE83_RS01335 (AXE83_01335) - 257952..258626 (+) 675 WP_060955137.1 hypothetical protein -
  AXE83_RS01340 (AXE83_01340) rpmB 258733..258921 (+) 189 WP_001140948.1 50S ribosomal protein L28 -
  AXE83_RS01345 (AXE83_01345) - 259072..259437 (+) 366 WP_000216431.1 Asp23/Gls24 family envelope stress response protein -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 65429.78 Da        Isoelectric Point: 6.0401

>NTDB_id=169978 AXE83_RS01310 WP_060955134.1 252986..254755(+) (rcrP) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
MKKLAKRITGKEWGMILITVLFTCCSVYLELEVPTYVSKITELLGTPGTELGDLWSPATKMMGLSFLAFLSSVTVGFFAA
RVAASYTAHLRSDIFNRVLDYSQTEIKRFSIPSLLTRTTNDITQIQMLFTMGLQVVTRGPIMALWAIGKILGKSEYWIWA
VVVAVIVNVLMTTVLMTLAFPKQSVIQKLTDKLNSITRESLTGIRVVRAYNAEEYQDKKFEESNDEVTRINLFVSRLMAI
MNPIMMAISSGLVLAIYWIGAYLINDASLTERLPLFSDMVVFMSYAMQVVMGFLLMGALFIVLPRTLVSAGRINQVLDLH
STIENPSHPQTANSSVIGQVEYRDVTFRYSNNSEAVVEHVSFKAEAGQTIAFIGSTGSGKSTLVNLLPRFYDVSDGEILV
DGVNVQNYDLEDLRNKVGYIPQKAVLFSGDVKGNLDFGKSQETPLSETAMWQALELAQSKNFIEDKEAGIASEVAQGGTN
FSGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRILRQVLAEKTQSMTKLIVAQRISTIMDADLILVLDQGKVVGQG
THKELLANNEVYQEIAYSQLSKEELEHGK

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=169978 AXE83_RS01310 WP_060955134.1 252986..254755(+) (rcrP) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
ATGAAGAAACTCGCTAAGCGTATCACAGGAAAAGAGTGGGGCATGATTCTAATAACTGTTCTCTTTACCTGTTGCTCGGT
CTATCTAGAGTTAGAAGTACCGACTTACGTTTCAAAAATAACAGAATTACTCGGAACGCCAGGTACGGAGTTGGGAGACC
TTTGGTCGCCAGCAACTAAGATGATGGGTTTGTCATTCTTAGCCTTCCTATCATCTGTAACAGTTGGATTTTTTGCCGCT
CGAGTTGCAGCATCCTATACGGCTCATCTACGAAGCGATATTTTTAATCGTGTTTTGGATTACTCCCAGACAGAAATTAA
ACGTTTTTCAATTCCCAGTCTATTGACTCGGACAACTAATGATATCACGCAGATTCAGATGCTCTTTACCATGGGACTTC
AGGTAGTCACTCGCGGACCAATCATGGCGCTTTGGGCTATTGGGAAAATCCTTGGCAAGTCAGAATACTGGATCTGGGCA
GTAGTGGTGGCCGTTATCGTCAATGTTCTGATGACAACTGTTCTCATGACTCTGGCCTTTCCTAAACAATCTGTCATCCA
AAAATTGACAGATAAACTCAATAGTATCACCCGTGAAAGTTTGACTGGGATTCGGGTTGTTCGTGCTTACAATGCTGAGG
AATACCAAGATAAGAAATTCGAAGAATCCAATGATGAAGTCACACGAATCAATCTCTTTGTCAGTCGCTTAATGGCTATT
ATGAATCCTATTATGATGGCGATTTCTAGCGGCTTGGTCCTTGCCATTTACTGGATTGGTGCTTATCTTATCAACGACGC
TAGCTTGACAGAGCGTCTACCACTCTTTAGCGATATGGTGGTCTTCATGTCCTATGCTATGCAAGTGGTAATGGGCTTCT
TACTCATGGGTGCTCTCTTTATCGTTCTTCCTCGTACCTTGGTTTCTGCAGGTCGTATCAATCAAGTCTTGGACCTTCAT
TCCACTATTGAAAATCCTAGTCACCCACAGACAGCAAACTCTTCTGTAATTGGTCAAGTAGAATACCGCGACGTAACCTT
CCGCTACTCTAACAACTCAGAAGCAGTTGTGGAGCATGTCAGCTTCAAGGCAGAAGCAGGGCAAACCATTGCTTTTATTG
GTTCAACTGGTTCTGGTAAATCGACACTTGTTAACCTCTTGCCACGTTTTTACGATGTTTCAGATGGAGAAATCCTAGTA
GACGGCGTCAATGTTCAGAATTATGACTTAGAAGATTTGCGTAATAAAGTTGGCTATATCCCTCAAAAAGCTGTGCTCTT
TTCTGGAGATGTTAAGGGCAATCTCGACTTTGGTAAGAGTCAAGAAACGCCACTAAGTGAGACGGCCATGTGGCAAGCTC
TGGAATTGGCTCAATCTAAAAATTTTATAGAAGATAAGGAAGCAGGTATAGCTTCAGAAGTAGCTCAAGGCGGGACTAAT
TTCTCAGGTGGACAGAGACAACGTCTGGCCATTGCACGCGCCTTGGCTCGTAAACCAGAGATTCTCATTTTTGATGATTC
ATTCTCAGCCTTGGACTACAAGACAGACCGTATCTTGCGTCAAGTATTAGCTGAAAAAACACAATCCATGACCAAGTTAA
TCGTTGCCCAACGCATTTCAACCATTATGGATGCAGACCTGATCTTAGTCTTGGATCAAGGTAAAGTCGTGGGACAAGGC
ACCCACAAGGAACTTCTTGCAAACAATGAAGTTTACCAAGAAATTGCCTATTCACAACTATCGAAGGAGGAATTGGAACA
TGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(358-507)

ABC transporter transmembrane region (ABC_membrane)

(54-292)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0X8JWN3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

64.892

100

0.662

Multiple sequence alignment