Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | AXF37_RS03255 | Genome accession | NZ_CP014257 |
| Coordinates | 691977..692681 (-) | Length | 234 a.a. |
| NCBI ID | WP_027223686.1 | Uniprot ID | - |
| Organism | Legionella pneumophila subsp. pascullei strain D-7119 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 686977..697681
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AXF37_RS03240 (AXF37_03240) | - | 689852..690364 (-) | 513 | WP_027223683.1 | pilus assembly PilX family protein | - |
| AXF37_RS03245 (AXF37_03245) | - | 690361..691428 (-) | 1068 | WP_027223684.1 | PilW family protein | - |
| AXF37_RS03250 (AXF37_03250) | pilV | 691425..691964 (-) | 540 | WP_027223685.1 | type IV pilus modification protein PilV | - |
| AXF37_RS03255 (AXF37_03255) | fimT | 691977..692681 (-) | 705 | WP_027223686.1 | GspH/FimT family pseudopilin | Machinery gene |
| AXF37_RS03260 (AXF37_03260) | - | 692896..693759 (-) | 864 | WP_027223687.1 | polysaccharide deacetylase family protein | - |
| AXF37_RS03265 (AXF37_03265) | - | 693935..695284 (-) | 1350 | WP_080273326.1 | lpg0634 family Dot/Icm T4SS effector | - |
| AXF37_RS03270 (AXF37_03270) | - | 695559..697040 (+) | 1482 | WP_027223689.1 | ArnT family glycosyltransferase | - |
Sequence
Protein
Download Length: 234 a.a. Molecular weight: 24957.58 Da Isoelectric Point: 7.9577
>NTDB_id=169851 AXF37_RS03255 WP_027223686.1 691977..692681(-) (fimT) [Legionella pneumophila subsp. pascullei strain D-7119]
MNKVIRESQRFTVRNVATLLFCVDTSVLPTKSNIAQNKETKIIYNHLCKDSFDTEIPLNSSPLSIAGFTLVELLVTLSVF
AIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPEAGTPTLL
KTHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGATPGQAVWNNGALNCP
MNKVIRESQRFTVRNVATLLFCVDTSVLPTKSNIAQNKETKIIYNHLCKDSFDTEIPLNSSPLSIAGFTLVELLVTLSVF
AIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPEAGTPTLL
KTHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGATPGQAVWNNGALNCP
Nucleotide
Download Length: 705 bp
>NTDB_id=169851 AXF37_RS03255 WP_027223686.1 691977..692681(-) (fimT) [Legionella pneumophila subsp. pascullei strain D-7119]
TTGAACAAAGTGATAAGGGAATCACAAAGGTTCACTGTGCGCAATGTCGCTACTTTATTATTTTGTGTGGACACAAGTGT
GTTGCCCACAAAATCTAATATAGCACAAAATAAAGAAACAAAAATAATATACAATCACCTTTGCAAAGACAGCTTTGATA
CTGAAATCCCCCTTAACAGTAGCCCTCTTTCTATAGCAGGATTCACACTGGTTGAGTTATTAGTCACCCTATCTGTTTTC
GCCATCATCTTAACTCTAATTGTACCTTCATTAAGGACAATGATTTTGAATAACCGTTTGACTTCAAACATTGATTCATT
GGTAAGCTCATTAAATTATGCACGCGGAGTGGCACTTGATCGGGCCGTCAATGTAGCAGTATGTCCGTTAGGCTCACCAG
GTTCAACAGCATGTGGCGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCCGAAGCCGGCACACCCACTCTTTTA
AAAACTCACCAAACCTCAGTGAATGACCCTGTTATCACATCTAATGTATCCAGTGTTGTTTTTGACCCGCATGGATTATC
AACTACCCAAAGTAACTTTACTATGTGTGATAACCGAGGAAATGCGTTTGCCCGATCTGCAATGGTTTTGGCTACCGGAT
TTGTCCAATCTGGAGCAACACCCGGCCAGGCTGTCTGGAATAATGGGGCTCTAAACTGCCCTTGA
TTGAACAAAGTGATAAGGGAATCACAAAGGTTCACTGTGCGCAATGTCGCTACTTTATTATTTTGTGTGGACACAAGTGT
GTTGCCCACAAAATCTAATATAGCACAAAATAAAGAAACAAAAATAATATACAATCACCTTTGCAAAGACAGCTTTGATA
CTGAAATCCCCCTTAACAGTAGCCCTCTTTCTATAGCAGGATTCACACTGGTTGAGTTATTAGTCACCCTATCTGTTTTC
GCCATCATCTTAACTCTAATTGTACCTTCATTAAGGACAATGATTTTGAATAACCGTTTGACTTCAAACATTGATTCATT
GGTAAGCTCATTAAATTATGCACGCGGAGTGGCACTTGATCGGGCCGTCAATGTAGCAGTATGTCCGTTAGGCTCACCAG
GTTCAACAGCATGTGGCGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCCGAAGCCGGCACACCCACTCTTTTA
AAAACTCACCAAACCTCAGTGAATGACCCTGTTATCACATCTAATGTATCCAGTGTTGTTTTTGACCCGCATGGATTATC
AACTACCCAAAGTAACTTTACTATGTGTGATAACCGAGGAAATGCGTTTGCCCGATCTGCAATGGTTTTGGCTACCGGAT
TTGTCCAATCTGGAGCAACACCCGGCCAGGCTGTCTGGAATAATGGGGCTCTAAACTGCCCTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Legionella pneumophila strain Lp02 |
89.787 |
100 |
0.902 |