Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | AXF35_RS03325 | Genome accession | NZ_CP014255 |
| Coordinates | 692072..692776 (-) | Length | 234 a.a. |
| NCBI ID | WP_027223686.1 | Uniprot ID | - |
| Organism | Legionella pneumophila subsp. pascullei strain F-4185 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 687072..697776
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AXF35_RS03310 (AXF35_13435) | - | 689947..690459 (-) | 513 | WP_027223683.1 | pilus assembly PilX family protein | - |
| AXF35_RS03315 (AXF35_13430) | - | 690456..691523 (-) | 1068 | WP_027223684.1 | PilW family protein | - |
| AXF35_RS03320 (AXF35_13425) | pilV | 691520..692059 (-) | 540 | WP_027223685.1 | type IV pilus modification protein PilV | - |
| AXF35_RS03325 (AXF35_13420) | fimT | 692072..692776 (-) | 705 | WP_027223686.1 | GspH/FimT family pseudopilin | Machinery gene |
| AXF35_RS03330 (AXF35_13415) | - | 692991..693854 (-) | 864 | WP_027223687.1 | polysaccharide deacetylase family protein | - |
| AXF35_RS03335 (AXF35_13410) | - | 694030..695379 (-) | 1350 | WP_080273326.1 | lpg0634 family Dot/Icm T4SS effector | - |
| AXF35_RS03340 (AXF35_13405) | - | 695654..697135 (+) | 1482 | WP_027223689.1 | ArnT family glycosyltransferase | - |
Sequence
Protein
Download Length: 234 a.a. Molecular weight: 24957.58 Da Isoelectric Point: 7.9577
>NTDB_id=169810 AXF35_RS03325 WP_027223686.1 692072..692776(-) (fimT) [Legionella pneumophila subsp. pascullei strain F-4185]
MNKVIRESQRFTVRNVATLLFCVDTSVLPTKSNIAQNKETKIIYNHLCKDSFDTEIPLNSSPLSIAGFTLVELLVTLSVF
AIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPEAGTPTLL
KTHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGATPGQAVWNNGALNCP
MNKVIRESQRFTVRNVATLLFCVDTSVLPTKSNIAQNKETKIIYNHLCKDSFDTEIPLNSSPLSIAGFTLVELLVTLSVF
AIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPEAGTPTLL
KTHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGATPGQAVWNNGALNCP
Nucleotide
Download Length: 705 bp
>NTDB_id=169810 AXF35_RS03325 WP_027223686.1 692072..692776(-) (fimT) [Legionella pneumophila subsp. pascullei strain F-4185]
TTGAACAAAGTGATAAGGGAATCACAAAGGTTCACTGTGCGCAATGTCGCTACTTTATTATTTTGTGTGGACACAAGTGT
GTTGCCCACAAAATCTAATATAGCACAAAATAAAGAAACAAAAATAATATACAATCACCTTTGCAAAGACAGCTTTGATA
CTGAAATCCCCCTTAACAGTAGCCCTCTTTCTATAGCAGGATTCACACTGGTTGAGTTATTAGTCACCCTATCTGTTTTC
GCCATCATCTTAACTCTAATTGTACCTTCATTAAGGACAATGATTTTGAATAACCGTTTGACTTCAAACATTGATTCATT
GGTAAGCTCATTAAATTATGCACGCGGAGTGGCACTTGATCGGGCCGTCAATGTAGCAGTATGTCCGTTAGGCTCACCAG
GTTCAACAGCATGTGGCGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCCGAAGCCGGCACACCCACTCTTTTA
AAAACTCACCAAACCTCAGTGAATGACCCTGTTATCACATCTAATGTATCCAGTGTTGTTTTTGACCCGCATGGATTATC
AACTACCCAAAGTAACTTTACTATGTGTGATAACCGAGGAAATGCGTTTGCCCGATCTGCAATGGTTTTGGCTACCGGAT
TTGTCCAATCTGGAGCAACACCCGGCCAGGCTGTCTGGAATAATGGGGCTCTAAACTGCCCTTGA
TTGAACAAAGTGATAAGGGAATCACAAAGGTTCACTGTGCGCAATGTCGCTACTTTATTATTTTGTGTGGACACAAGTGT
GTTGCCCACAAAATCTAATATAGCACAAAATAAAGAAACAAAAATAATATACAATCACCTTTGCAAAGACAGCTTTGATA
CTGAAATCCCCCTTAACAGTAGCCCTCTTTCTATAGCAGGATTCACACTGGTTGAGTTATTAGTCACCCTATCTGTTTTC
GCCATCATCTTAACTCTAATTGTACCTTCATTAAGGACAATGATTTTGAATAACCGTTTGACTTCAAACATTGATTCATT
GGTAAGCTCATTAAATTATGCACGCGGAGTGGCACTTGATCGGGCCGTCAATGTAGCAGTATGTCCGTTAGGCTCACCAG
GTTCAACAGCATGTGGCGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCCGAAGCCGGCACACCCACTCTTTTA
AAAACTCACCAAACCTCAGTGAATGACCCTGTTATCACATCTAATGTATCCAGTGTTGTTTTTGACCCGCATGGATTATC
AACTACCCAAAGTAACTTTACTATGTGTGATAACCGAGGAAATGCGTTTGCCCGATCTGCAATGGTTTTGGCTACCGGAT
TTGTCCAATCTGGAGCAACACCCGGCCAGGCTGTCTGGAATAATGGGGCTCTAAACTGCCCTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Legionella pneumophila strain Lp02 |
89.787 |
100 |
0.902 |