Detailed information NTG0169366

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: A4W85_RS05605
• Genome accession: NZ_CP017570
• Coordinates: 1094787..1095833 (-)
• Length: 348 a.a.
• NCBI ID: WP_056946687.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain TMW 1.578
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 1089787..1100833

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A4W85_RS05580 (A4W85_05520)	rpsT	1089850..1090104 (+)	255	WP_011374767.1	30S ribosomal protein S20	-
A4W85_RS05585 (A4W85_05525)	holA	1090173..1091201 (-)	1029	WP_011374768.1	DNA polymerase III subunit delta	-
A4W85_RS05590 (A4W85_05530)	comEC	1091198..1093465 (-)	2268	WP_099947352.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
A4W85_RS05595 (A4W85_05535)	-	1093462..1093950 (-)	489	WP_011374770.1	ComE operon protein 2	-
A4W85_RS05600 (A4W85_05540)	comEA	1094008..1094715 (-)	708	WP_231952379.1	helix-hairpin-helix domain-containing protein	Machinery gene
A4W85_RS05605 (A4W85_05545)	sepM	1094787..1095833 (-)	1047	WP_056946687.1	SepM family pheromone-processing serine protease	Regulator
A4W85_RS05610 (A4W85_05550)	coaD	1095835..1096332 (-)	498	WP_011374773.1	pantetheine-phosphate adenylyltransferase	-
A4W85_RS05615 (A4W85_05555)	rsmD	1096345..1096899 (-)	555	WP_251944585.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
A4W85_RS05620 (A4W85_05560)	-	1096904..1097194 (-)	291	WP_011374775.1	YlbG family protein	-
A4W85_RS05625 (A4W85_05565)	-	1097218..1098306 (-)	1089	WP_251944587.1	CAP-associated domain-containing protein	-
A4W85_RS05630 (A4W85_05570)	-	1098317..1099504 (-)	1188	WP_011374777.1	FtsW/RodA/SpoVE family cell cycle protein	-
A4W85_RS05635 (A4W85_05575)	-	1099513..1099809 (-)	297	WP_011374778.1	YlaN family protein	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38138.94 Da
• Isoelectric Point: 9.6949

>NTDB_id=169366 A4W85_RS05605 WP_056946687.1 1094787..1095833(-) (sepM) [Latilactobacillus sakei strain TMW 1.578]
MPKNKKLTKRLIVIVVLIIVAVVCLMPTGYYIEGAGTAENTSQYVKVDGKHDHQKGHFMLTTVGVRGPVTPLQLLLSKTQ
PFTEIESRDELMGNEDTEAYEQIQKYYMDSSINAAVEAAYKKADKAYHTKYLGVYVMSMLGNSTFKDDLAVGDTITAIDH
HQFKNANAFVKYVQGLKVGQKVTVSYDHGQKHQTATHRLIKLPRTHHPGLGITLTDHSKIETNIPVKIDAGDIGGPSAGL
MFTLQVYNQLTKQNLQKGRTIAGTGTMAADGTVGAIGGIDKKVLVASQEGATVFFAPNDPVTKAILKVDPDYQNNYTIAK
NAAKKIHTKMKIVPVKTLDDALTYLKNH

Nucleotide

• Length: 1047 bp

>NTDB_id=169366 A4W85_RS05605 WP_056946687.1 1094787..1095833(-) (sepM) [Latilactobacillus sakei strain TMW 1.578]
ATGCCAAAAAATAAGAAACTGACAAAACGATTAATTGTAATTGTGGTTTTAATCATTGTTGCAGTTGTTTGTTTAATGCC
CACTGGCTATTATATTGAAGGTGCCGGGACCGCAGAAAATACCAGCCAATATGTTAAGGTCGACGGTAAACATGATCATC
AAAAAGGCCATTTTATGCTGACAACTGTTGGTGTCAGAGGTCCAGTAACACCGTTGCAATTATTATTGTCCAAGACGCAA
CCTTTTACGGAAATTGAAAGTCGTGACGAATTGATGGGCAATGAAGATACCGAAGCTTACGAACAGATTCAAAAGTACTA
TATGGATAGTTCAATTAACGCTGCCGTTGAAGCCGCCTATAAAAAAGCTGATAAGGCCTACCATACGAAGTATCTGGGCG
TTTATGTGATGTCGATGTTAGGCAACTCCACTTTTAAAGATGATTTAGCAGTCGGTGATACGATTACCGCGATTGATCAT
CATCAATTTAAAAATGCCAATGCTTTTGTAAAGTATGTCCAAGGTTTGAAAGTTGGTCAAAAGGTCACGGTTAGTTACGA
TCATGGTCAAAAACATCAAACGGCAACGCATCGTTTGATTAAATTACCAAGGACGCATCATCCGGGCCTCGGGATTACGT
TAACAGATCATTCTAAAATCGAAACCAATATCCCGGTTAAAATTGATGCCGGTGATATTGGGGGCCCATCTGCAGGCTTG
ATGTTTACGTTGCAAGTTTATAATCAATTAACGAAGCAAAATCTCCAAAAGGGTCGTACAATTGCGGGGACCGGCACAAT
GGCTGCTGATGGTACTGTAGGTGCTATTGGTGGGATTGATAAAAAGGTACTGGTCGCTAGTCAAGAAGGCGCAACGGTCT
TTTTTGCACCGAATGATCCTGTAACAAAGGCAATTTTAAAGGTTGATCCTGATTATCAAAATAATTATACAATCGCTAAA
AATGCCGCTAAAAAAATTCATACTAAGATGAAGATCGTACCGGTCAAAACCTTAGATGATGCGTTAACTTATTTGAAAAA
CCATTAA

Domains

Predicted by InterProScan.

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (207-310)

• PDZ domain (PDZ_2) (131-196)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	43.966	100	0.44