Detailed information NTG0169285

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: A4W84_RS05465
• Genome accession: NZ_CP017568
• Coordinates: 1078031..1079077 (-)
• Length: 348 a.a.
• NCBI ID: WP_251908017.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain TMW 1.417
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 1073031..1084077

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A4W84_RS05440 (A4W84_05355)	rpsT	1073094..1073348 (+)	255	WP_011374767.1	30S ribosomal protein S20	-
A4W84_RS05445 (A4W84_05360)	holA	1073417..1074445 (-)	1029	WP_011374768.1	DNA polymerase III subunit delta	-
A4W84_RS05450 (A4W84_05365)	comEC	1074442..1076709 (-)	2268	WP_251908015.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
A4W84_RS05455 (A4W84_05370)	-	1076706..1077194 (-)	489	WP_011374770.1	ComE operon protein 2	-
A4W84_RS05460 (A4W84_05375)	comEA	1077252..1077959 (-)	708	WP_231952379.1	helix-hairpin-helix domain-containing protein	Machinery gene
A4W84_RS05465 (A4W84_05380)	sepM	1078031..1079077 (-)	1047	WP_251908017.1	SepM family pheromone-processing serine protease	Regulator
A4W84_RS05470 (A4W84_05385)	coaD	1079079..1079576 (-)	498	WP_251908018.1	pantetheine-phosphate adenylyltransferase	-
A4W84_RS05475 (A4W84_05390)	rsmD	1079589..1080143 (-)	555	WP_011374774.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
A4W84_RS05480 (A4W84_05395)	-	1080148..1080438 (-)	291	WP_011374775.1	YlbG family protein	-
A4W84_RS05485 (A4W84_05400)	-	1080462..1081550 (-)	1089	WP_250824293.1	CAP-associated domain-containing protein	-
A4W84_RS05490 (A4W84_05405)	-	1081561..1082748 (-)	1188	WP_011374777.1	FtsW/RodA/SpoVE family cell cycle protein	-
A4W84_RS05495 (A4W84_05410)	-	1082757..1083053 (-)	297	WP_011374778.1	YlaN family protein	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38183.98 Da
• Isoelectric Point: 9.6142

>NTDB_id=169285 A4W84_RS05465 WP_251908017.1 1078031..1079077(-) (sepM) [Latilactobacillus sakei strain TMW 1.417]
MPKNKKLTKRLIIIVVLIIVAVVCLMPTGYYIEGAGTAENTSQYVKVDGKHDHQKGHFMLTTVGVRGPVTPLQLLLSKTQ
PFTEIESRDELMGNEDTETYEQIQKYYMDSSINAAVEAAYKKADKAYHTKYLGVYVMSMLGNSTFKDDLAVGDTITAIDH
HQFKNANAFVKYVQGLKVGQKVTVSYDHGQKHQTATHRLIKLPRTHHPGLGITLTDHSKIETDIPVKIDAGDIGGPSAGL
MFTLQVYNQLTKQNLQKGRTIAGTGTMAADGTVGAIGGIDKKVLVASQEGATVFFAPNDPVTKAILKVDPDYQNNYTIAK
NAAKKIHTKMKIVPVKTLDDALTYLKNH

Nucleotide

• Length: 1047 bp

>NTDB_id=169285 A4W84_RS05465 WP_251908017.1 1078031..1079077(-) (sepM) [Latilactobacillus sakei strain TMW 1.417]
ATGCCAAAAAATAAGAAACTGACAAAACGATTAATTATAATTGTGGTTTTAATCATTGTTGCAGTTGTTTGTTTAATGCC
CACTGGCTATTATATTGAAGGTGCCGGGACCGCAGAAAATACCAGCCAATATGTTAAGGTCGACGGTAAACATGATCATC
AAAAAGGCCATTTTATGCTGACAACTGTTGGTGTCAGAGGTCCAGTAACACCGTTGCAATTATTATTGTCCAAGACGCAA
CCTTTTACGGAAATTGAAAGTCGTGACGAATTGATGGGCAATGAAGATACCGAAACTTACGAACAGATTCAAAAGTACTA
TATGGATAGTTCAATTAACGCTGCCGTTGAAGCCGCCTATAAAAAAGCTGATAAGGCCTACCATACGAAGTATCTGGGCG
TTTATGTGATGTCGATGTTAGGCAACTCCACTTTTAAAGATGATTTAGCAGTCGGTGATACGATTACCGCGATTGATCAT
CATCAATTTAAAAATGCCAATGCTTTTGTAAAGTATGTCCAAGGTTTGAAAGTTGGTCAAAAGGTCACGGTTAGTTACGA
TCATGGTCAAAAACATCAAACGGCAACGCATCGTTTGATTAAATTACCAAGGACGCATCATCCGGGCCTCGGGATTACGT
TAACAGATCATTCTAAAATCGAAACCGATATCCCGGTTAAAATTGATGCCGGTGATATTGGGGGCCCATCTGCAGGCTTG
ATGTTTACGTTGCAAGTTTATAATCAATTAACGAAGCAAAATCTCCAAAAGGGTCGTACAATTGCGGGGACCGGCACAAT
GGCTGCTGATGGTACTGTAGGTGCTATTGGTGGGATTGATAAAAAGGTACTGGTCGCTAGTCAAGAAGGCGCAACGGTCT
TTTTTGCACCGAATGATCCTGTAACAAAGGCAATTTTAAAGGTTGATCCTGATTATCAAAATAATTATACAATCGCTAAA
AATGCCGCTAAAAAAATTCATACTAAGATGAAGATTGTACCGGTCAAAACCTTAGATGATGCGTTAACTTATTTGAAAAA
CCATTAA

Domains

Predicted by InterProScan.

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (210-310)

• PDZ domain (PDZ_2) (131-196)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	44.253	100	0.443