Detailed information NTG0169166

Bioinformatically predicted

Overview

• Name: hexA
• Type: Machinery gene
• Locus tag: A4W83_RS01910
• Genome accession: NZ_CP017566
• Coordinates: 382270..384873 (+)
• Length: 867 a.a.
• NCBI ID: WP_251945176.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain TMW 1.114
• Function: DNA mismatch repair (predicted from homology) Homologous recombination

Genomic Context

Location: 377270..389873

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A4W83_RS01890 (A4W83_01850)	groL	377312..378937 (+)	1626	WP_035146245.1	chaperonin GroEL	-
A4W83_RS01895	-	378975..379127 (-)	153	WP_155516314.1	hypothetical protein	-
A4W83_RS01900 (A4W83_01855)	-	379436..381265 (+)	1830	WP_251945174.1	APC family permease	-
A4W83_RS01905 (A4W83_01860)	-	381442..382248 (+)	807	WP_011374070.1	TIGR00282 family metallophosphoesterase	-
A4W83_RS01910 (A4W83_01865)	hexA	382270..384873 (+)	2604	WP_251945176.1	DNA mismatch repair protein MutS	Machinery gene
A4W83_RS01915 (A4W83_01870)	hexB	384897..386858 (+)	1962	WP_056947790.1	DNA mismatch repair endonuclease MutL	Machinery gene
A4W83_RS01920 (A4W83_01875)	-	386858..387403 (+)	546	WP_056947792.1	Maf family protein	-
A4W83_RS01925 (A4W83_01880)	-	387416..387979 (+)	564	Protein_378	TIGR00730 family Rossman fold protein	-
A4W83_RS01930 (A4W83_01885)	ruvA	388390..389001 (+)	612	WP_011374075.1	Holliday junction branch migration protein RuvA	Machinery gene

Sequence

Protein

• Length: 867 a.a.
• Molecular weight: 96776.59 Da
• Isoelectric Point: 5.3178

>NTDB_id=169166 A4W83_RS01910 WP_251945176.1 382270..384873(+) (hexA) [Latilactobacillus sakei strain TMW 1.114]
MPQKTKETPMMAQYQKVKDQYPDAFLFYRLGDFYELFNDDAVKASQLLELTLTARNKNAADPIPMCGVPHHAAQNYIDIL
VDQGYKVAICEQMEDPKTAKGMVKREVVQLVTPGTVMDEKAGHAKQNNYLTAVVAQGDQFGFAYTDLSTGEMKVSQISSL
DVLLNEMLSLQTKEVVVNHDVPSEVVQAFVQQQILVSYQDEGADTAEVSFVSQNISQPLALAVIKQLVVYLATTQKRHLG
HLQRAQAYEPSQYLKLDHSAKMNLELTASLRTGHKSGTLLWLLDETKTAMGGRLLKQWLERPLLDLNQIKNRQNQVASFL
QHYFERTNLQEALTKVYDLERLAGRVAFGSVNGRDLIQLKTSLEQIPKIKDVLTGINETQAFDQALTRLDPVDDVRTLIE
TAINPDSPISVTDGGIIQDGYDEQLDQYRNAMSNGKQWLAQLEAQEREATGIHNLKIGFNRVFGYYIEVTRANLSSLPEG
RYERKQTLTNAERFITPELKEKEQLILEAEERSTALEYELFTQVREQVKLQIERLQTLAKGVAALDVLQSFAVVSESYHY
VQPTLRTDSREIDLVDGRHPVVEKVLGRQKYIPNAVQMGKETDMLLITGPNMSGKSTYMRQLALTVIMAQMGCFVPAKSA
NLPVFDQIFTRIGAADDLISGQSTFMVEMMEANRAIMSATANSLILFDEIGRGTATYDGMALAQAIIEYIHDHVHAKTLF
STHYHELTALADTLTALRNVHVGAVEENGELVFLHKMLAGPADKSYGIHVAKLAGMPETLLQRADVILGQLEDKPKAPVQ
PATVVPAQPAAAAVEEQMALFEPEVAAPVDKKTDKVVAAIKNFDLMSATPLEALNQLYEWQKQLNKH

Nucleotide

• Length: 2604 bp

>NTDB_id=169166 A4W83_RS01910 WP_251945176.1 382270..384873(+) (hexA) [Latilactobacillus sakei strain TMW 1.114]
ATGCCGCAAAAAACAAAAGAAACGCCAATGATGGCCCAATATCAAAAGGTTAAGGATCAATATCCAGACGCCTTTTTATT
TTATAGATTGGGTGATTTTTACGAATTATTCAATGACGATGCTGTTAAAGCATCACAACTTTTAGAATTAACGCTGACAG
CGCGTAATAAGAATGCAGCAGACCCCATTCCGATGTGTGGTGTGCCCCATCATGCAGCGCAAAACTACATTGATATTTTA
GTGGATCAAGGTTACAAGGTCGCCATTTGTGAACAGATGGAAGATCCTAAAACGGCTAAGGGCATGGTCAAACGCGAAGT
CGTTCAATTAGTAACACCTGGGACTGTGATGGACGAAAAAGCCGGTCACGCTAAACAAAATAATTATTTAACGGCAGTCG
TTGCACAGGGCGATCAATTTGGCTTCGCCTATACAGATTTATCCACAGGTGAAATGAAGGTTAGCCAAATCAGTAGTTTA
GATGTGTTATTAAACGAAATGTTGAGTTTACAAACCAAAGAAGTGGTTGTGAATCATGATGTCCCAAGCGAAGTCGTTCA
AGCCTTTGTCCAACAACAAATCTTGGTTTCTTATCAAGATGAGGGGGCCGATACGGCAGAGGTCAGTTTTGTTTCTCAAA
ACATCTCACAACCACTAGCGTTAGCCGTCATTAAACAATTAGTTGTTTATTTAGCAACGACGCAAAAGCGGCACTTGGGT
CATTTACAACGCGCCCAAGCCTATGAACCTTCTCAATACTTGAAGTTGGATCATTCGGCTAAGATGAACCTCGAATTGAC
GGCTTCATTACGAACTGGTCATAAGAGCGGGACGTTATTGTGGCTACTGGATGAAACAAAGACTGCGATGGGTGGTCGCT
TATTAAAACAATGGTTGGAACGACCATTGTTGGATTTAAACCAGATTAAGAACCGGCAAAACCAAGTCGCTAGTTTCTTA
CAGCATTACTTTGAACGGACGAACCTTCAAGAAGCCCTAACTAAAGTTTATGATTTGGAACGTCTAGCAGGCCGCGTTGC
TTTTGGGAGCGTTAATGGGCGCGATTTGATTCAATTAAAAACATCCTTAGAACAGATTCCAAAGATTAAAGATGTTTTGA
CGGGCATTAACGAAACGCAGGCTTTTGATCAAGCGTTAACGCGTTTGGATCCAGTTGATGATGTGCGGACGTTAATTGAA
ACAGCGATTAACCCGGATTCACCGATTTCAGTGACTGATGGTGGGATTATTCAAGATGGTTACGACGAACAACTTGATCA
ATACCGCAATGCGATGTCTAACGGCAAGCAGTGGTTGGCGCAATTAGAGGCGCAAGAACGAGAAGCTACGGGCATTCATA
ATTTGAAAATCGGCTTTAACCGCGTCTTTGGGTATTATATCGAAGTCACGCGGGCTAACTTGAGTTCATTACCGGAAGGG
CGGTATGAACGCAAACAAACGTTAACCAACGCCGAACGATTCATCACACCGGAATTAAAAGAAAAAGAACAACTGATTTT
AGAGGCGGAAGAACGCTCAACCGCTCTAGAATACGAATTGTTTACCCAAGTTCGGGAACAAGTGAAGTTACAAATTGAAC
GGCTCCAAACATTGGCTAAAGGCGTAGCGGCCCTAGATGTCTTGCAAAGTTTTGCGGTCGTCAGCGAAAGCTACCACTAT
GTCCAACCAACATTAAGAACTGATAGTCGCGAAATTGATTTAGTCGATGGCCGTCATCCGGTGGTTGAAAAGGTATTGGG
ACGCCAAAAATATATCCCCAATGCTGTTCAAATGGGCAAAGAAACGGATATGTTATTAATTACCGGACCTAATATGTCTG
GTAAAAGTACCTACATGCGGCAATTGGCCTTAACGGTCATCATGGCGCAAATGGGTTGTTTTGTACCTGCCAAGTCAGCG
AACTTGCCTGTATTTGACCAAATCTTTACCCGCATTGGTGCGGCAGATGATTTGATTTCAGGACAAAGTACGTTTATGGT
AGAAATGATGGAAGCCAACCGTGCGATTATGAGTGCGACCGCCAATAGTTTAATTCTCTTCGATGAAATTGGTCGGGGAA
CGGCCACTTATGATGGGATGGCCTTGGCGCAAGCGATTATCGAATATATCCATGATCACGTCCACGCCAAGACGCTCTTT
TCAACGCATTATCATGAACTGACGGCTTTAGCCGATACGTTGACCGCCCTTCGTAACGTGCATGTTGGTGCAGTTGAGGA
AAACGGCGAGTTGGTCTTCTTACACAAGATGTTGGCCGGACCTGCGGATAAGTCTTACGGGATTCATGTCGCTAAACTAG
CGGGCATGCCAGAAACCTTATTACAACGGGCCGATGTTATTTTAGGTCAATTAGAAGATAAACCAAAAGCACCGGTGCAA
CCAGCAACAGTCGTACCAGCACAACCGGCTGCAGCGGCTGTCGAAGAACAGATGGCGCTTTTTGAACCAGAAGTGGCGGC
CCCGGTCGATAAGAAAACAGATAAAGTGGTAGCGGCAATTAAGAATTTTGATTTGATGAGCGCCACACCACTAGAAGCCC
TCAATCAATTATATGAGTGGCAAAAGCAATTAAATAAACATTAA

Domains

Predicted by InterProScan.

• MutS domain I (MutS_I) (8-119)

• MutS domain II (MutS_II) (128-243)

• MutS family domain IV (MutS_IV) (420-512)

• MutS domain V (MutS_V) (605-792)

• MutS domain III (MutS_III) (263-552)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
hexA	Streptococcus pneumoniae R6	52.139	99.769	0.52
mutS	Pseudomonas stutzeri strain ATCC 17587	38.655	100	0.391