Detailed information    

insolico Bioinformatically predicted

Overview


Name   kre   Type   Regulator
Locus tag   AWM80_RS07685 Genome accession   NZ_CP014166
Coordinates   1453827..1454291 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis subsp. subtilis strain CU1050     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 1448827..1459291
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AWM80_RS07665 (AWM80_07670) kinA 1449293..1451113 (+) 1821 WP_003245779.1 sporulation histidine kinase KinA -
  AWM80_RS07670 (AWM80_07675) dapX 1451124..1452305 (-) 1182 WP_003232415.1 aminotransferase A -
  AWM80_RS07675 (AWM80_07680) - 1452507..1452668 (-) 162 WP_003245246.1 hypothetical protein -
  AWM80_RS07680 (AWM80_07685) cheV 1452872..1453783 (+) 912 WP_009967126.1 chemotaxis protein CheV -
  AWM80_RS07685 (AWM80_07690) kre 1453827..1454291 (-) 465 WP_003232406.1 YkyB family protein Regulator
  AWM80_RS07690 (AWM80_07695) ykuC 1454417..1455709 (-) 1293 WP_003245267.1 MFS transporter -
  AWM80_RS07695 (AWM80_07700) ltdD 1455785..1456279 (-) 495 WP_010886500.1 L,D-transpeptidase family protein -
  AWM80_RS07700 (AWM80_07705) ppeE 1456336..1457196 (-) 861 WP_003232400.1 metallophosphoesterase -
  AWM80_RS07705 (AWM80_07710) fadH 1457339..1458103 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence


Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=169118 AWM80_RS07685 WP_003232406.1 1453827..1454291(-) (kre) [Bacillus subtilis subsp. subtilis strain CU1050]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=169118 AWM80_RS07685 WP_003232406.1 1453827..1454291(-) (kre) [Bacillus subtilis subsp. subtilis strain CU1050]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTATCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains


Predicted by InterproScan.

(14-128)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment