Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   AWM80_RS04645 Genome accession   NZ_CP014166
Coordinates   904898..905692 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis subsp. subtilis strain CU1050     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context


Location: 899898..910692
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AWM80_RS04615 (AWM80_04620) sxzA 900705..901736 (+) 1032 WP_003243057.1 FecCD family ABC transporter permease -
  AWM80_RS04620 (AWM80_04625) yfhB 901851..902732 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  AWM80_RS04625 (AWM80_04630) yfhC 902820..903404 (+) 585 WP_003243940.1 nitroreductase family protein -
  AWM80_RS04630 (AWM80_04635) yfhD 903475..903666 (-) 192 WP_003233561.1 YfhD family protein -
  AWM80_RS04635 (AWM80_04640) yfhE 903733..903843 (-) 111 WP_003223230.1 YfhE family protein -
  AWM80_RS04640 (AWM80_04645) yfhF 903898..904809 (-) 912 WP_003244332.1 TIGR01777 family oxidoreductase -
  AWM80_RS04645 (AWM80_04650) recX 904898..905692 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  AWM80_RS04650 (AWM80_04655) yfhH 905694..906008 (+) 315 WP_003244592.1 YfhH family protein -
  AWM80_RS04660 (AWM80_04665) yfhI 906151..907344 (+) 1194 WP_003243500.1 MFS transporter -
  AWM80_RS04665 (AWM80_04670) sspK 907377..907529 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  AWM80_RS04670 (AWM80_04675) yfhJ 907654..907923 (+) 270 WP_003243789.1 YfhJ family protein -
  AWM80_RS04675 (AWM80_04680) yfhK 908068..908586 (+) 519 WP_003243363.1 SH3 domain-containing protein -
  AWM80_RS04680 (AWM80_04685) spdL 908671..909003 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  AWM80_RS04685 (AWM80_04690) ephM 908990..909850 (+) 861 WP_003243419.1 epoxide hydrolase EphM -

Sequence


Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=169101 AWM80_RS04645 WP_003243354.1 904898..905692(+) (recX) [Bacillus subtilis subsp. subtilis strain CU1050]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=169101 AWM80_RS04645 WP_003243354.1 904898..905692(+) (recX) [Bacillus subtilis subsp. subtilis strain CU1050]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains


Predicted by InterproScan.

(84-204)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment