Detailed information
Bioinformatically predicted
Overview
| Name | nin/comJ | Type | Regulator |
| Locus tag | AWM80_RS02005 | Genome accession | NZ_CP014166 |
| Coordinates | 371726..372124 (-) | Length | 132 a.a. |
| NCBI ID | WP_003246342.1 | Uniprot ID | A0AAE2SGH7 |
| Organism | Bacillus subtilis subsp. subtilis strain CU1050 | ||
| Function | represses the expression of nucA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 366726..377124
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AWM80_RS01975 (AWM80_01980) | yckA | 367302..367982 (-) | 681 | WP_003234624.1 | amino acid ABC transporter permease | - |
| AWM80_RS01980 (AWM80_01985) | yckB | 367992..368855 (-) | 864 | WP_009966510.1 | transporter substrate-binding domain-containing protein | - |
| AWM80_RS21540 | - | 369017..369214 (+) | 198 | WP_119122841.1 | hypothetical protein | - |
| AWM80_RS01990 (AWM80_01995) | yckC | 369233..369688 (+) | 456 | WP_003246356.1 | RDD family protein | - |
| AWM80_RS01995 (AWM80_02000) | yckD | 369770..370102 (+) | 333 | WP_003246247.1 | YckD family protein | - |
| AWM80_RS02000 (AWM80_02005) | bglC | 370256..371689 (+) | 1434 | WP_060757494.1 | 6-phospho-beta-glucosidase | - |
| AWM80_RS02005 (AWM80_02010) | nin/comJ | 371726..372124 (-) | 399 | WP_003246342.1 | DNA-entry nuclease inhibitor | Regulator |
| AWM80_RS02010 (AWM80_02015) | nucA/comI | 372151..372600 (-) | 450 | WP_003246436.1 | DNA-entry nuclease | Machinery gene |
| AWM80_RS02015 (AWM80_02020) | tlpC | 372768..374489 (-) | 1722 | WP_003246498.1 | methyl-accepting chemotaxis protein TlpC | - |
| AWM80_RS02020 (AWM80_02025) | hxlB | 374600..375157 (-) | 558 | WP_003246343.1 | 6-phospho-3-hexuloisomerase | - |
| AWM80_RS02025 (AWM80_02030) | hxlA | 375163..375795 (-) | 633 | WP_003246452.1 | 3-hexulose-6-phosphate synthase | - |
| AWM80_RS02030 (AWM80_02035) | hxlR | 376028..376390 (+) | 363 | WP_003246265.1 | transcriptional activator HxlR | - |
Sequence
Protein
Download Length: 132 a.a. Molecular weight: 14996.95 Da Isoelectric Point: 4.8991
>NTDB_id=169090 AWM80_RS02005 WP_003246342.1 371726..372124(-) (nin/comJ) [Bacillus subtilis subsp. subtilis strain CU1050]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILFRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILFRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV
Nucleotide
Download Length: 399 bp
>NTDB_id=169090 AWM80_RS02005 WP_003246342.1 371726..372124(-) (nin/comJ) [Bacillus subtilis subsp. subtilis strain CU1050]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTTCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTTCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nin/comJ | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |