Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | AWM80_RS00245 | Genome accession | NZ_CP014166 |
| Coordinates | 44847..45137 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis subsp. subtilis strain CU1050 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 39847..50137
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AWM80_RS00205 (AWM80_00210) | darA | 39870..40199 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| AWM80_RS00210 (AWM80_00215) | yaaR | 40212..40652 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| AWM80_RS00215 (AWM80_00220) | holB | 40664..41653 (+) | 990 | WP_003244417.1 | DNA polymerase III subunit delta' | - |
| AWM80_RS00220 (AWM80_00225) | ricT | 41656..42483 (+) | 828 | WP_003243571.1 | competence/sporulation regulator complex protein RicT | - |
| AWM80_RS00225 (AWM80_00230) | yabA | 42498..42857 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| AWM80_RS00230 (AWM80_00235) | trmNF | 42916..43659 (+) | 744 | WP_003244526.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| AWM80_RS00235 (AWM80_00240) | yazA | 43646..43945 (+) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| AWM80_RS00240 (AWM80_00245) | rsmI | 43920..44798 (+) | 879 | WP_003243457.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| AWM80_RS00245 (AWM80_00250) | abrB | 44847..45137 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| AWM80_RS00250 (AWM80_00255) | metG | 45632..47626 (+) | 1995 | WP_003226758.1 | methionine--tRNA ligase | - |
| AWM80_RS00255 (AWM80_00260) | dayD | 47705..48472 (+) | 768 | WP_003226756.1 | TatD family hydrolase | - |
| AWM80_RS00260 (AWM80_00265) | yabE | 48628..49941 (+) | 1314 | WP_003226754.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=169086 AWM80_RS00245 WP_003226760.1 44847..45137(-) (abrB) [Bacillus subtilis subsp. subtilis strain CU1050]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=169086 AWM80_RS00245 WP_003226760.1 44847..45137(-) (abrB) [Bacillus subtilis subsp. subtilis strain CU1050]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |