Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   AWM74_RS01215 Genome accession   NZ_CP014162
Coordinates   263946..265721 (-) Length   591 a.a.
NCBI ID   WP_026466289.1    Uniprot ID   A0AAC8WZB8
Organism   Aerococcus urinaeequi strain CCUG28094     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 258946..270721
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AWM74_RS01185 (AWM74_01185) - 259278..259538 (-) 261 WP_016896863.1 metal-sensitive transcriptional regulator -
  AWM74_RS01190 (AWM74_01190) - 259538..259834 (-) 297 WP_026466286.1 rhodanese-like domain-containing protein -
  AWM74_RS01195 (AWM74_01195) - 259834..261486 (-) 1653 WP_026466287.1 FAD-dependent oxidoreductase -
  AWM74_RS01200 (AWM74_01200) - 261486..261791 (-) 306 WP_003141799.1 rhodanese-like domain-containing protein -
  AWM74_RS09505 (AWM74_01205) - 261813..261998 (-) 186 WP_034258245.1 membrane protein insertion efficiency factor YidD -
  AWM74_RS01210 (AWM74_01210) rcrQ 262190..263953 (-) 1764 WP_026466288.1 ABC transporter ATP-binding protein Regulator
  AWM74_RS01215 (AWM74_01215) rcrP 263946..265721 (-) 1776 WP_026466289.1 ABC transporter ATP-binding protein Regulator
  AWM74_RS01220 (AWM74_01220) - 265750..266199 (-) 450 WP_026466290.1 MarR family winged helix-turn-helix transcriptional regulator -
  AWM74_RS01225 (AWM74_01225) purD 266461..267714 (-) 1254 WP_026466291.1 phosphoribosylamine--glycine ligase -
  AWM74_RS01230 (AWM74_01230) purH 267745..269265 (-) 1521 WP_026466292.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase -
  AWM74_RS01235 (AWM74_01235) purN 269318..269881 (-) 564 WP_026466293.1 phosphoribosylglycinamide formyltransferase -

Sequence

Protein


Download         Length: 591 a.a.        Molecular weight: 65425.45 Da        Isoelectric Point: 4.6695

>NTDB_id=169013 AWM74_RS01215 WP_026466289.1 263946..265721(-) (rcrP) [Aerococcus urinaeequi strain CCUG28094]
MLKILAKANKKEKFFALLSVLLIMLQVYLELEIPDYMSEITELLQMPDTVTADIWEPGLIMVGLSLASFASAILVGFFAA
RIAASLTARIRGEVFDKVMSYSANEINQFSVPSLVTRSTNDLTQIQMLIALGLQVVLRGPIMSIWAIAKISGQNWQWSMT
TAVAVGVLLVMIGFIMYFAVPRFSKIQTLTDNLNAVTRENLTGLRVIRAYNAEEYQNEKFAKANDDLTNTQLFVNRVMGI
MQPGMTLVSSSLTLVVYWSGAYLIADAAQGTAQINLFSDMVVFSSYAMQVIIGFLLMVMIFMILPRAIVSAKRINEVLYL
APSIDFKEDAIQTSEQGSVEFKNVTFKYGDDAKPALKDINFKINKGETLAIIGSTGSGKSTLIQMIPRLYDVSEGQVLVD
GHNVKDFDHAGLNNIVGYMPQKPVLFSGTIRSNMNLGESNEHLEHQSLSDEEIWAALDTAQARDFVEGEPDQLDTHVAQG
GNNFSGGQKQRLGIARVLARKPEILVFDDSFSALDYQTDKTLRGVLAERMADTTKIIVAQRISTIMDANEILVLDRGEIV
GRGTHQELLADNKVYQEIAYSQLSEEELAND

Nucleotide


Download         Length: 1776 bp        

>NTDB_id=169013 AWM74_RS01215 WP_026466289.1 263946..265721(-) (rcrP) [Aerococcus urinaeequi strain CCUG28094]
GTGCTAAAAATATTAGCGAAAGCAAATAAAAAGGAAAAATTTTTCGCTTTACTAAGCGTGCTGCTGATTATGCTGCAAGT
TTACTTAGAGTTAGAAATCCCTGACTACATGTCAGAAATTACAGAATTACTACAAATGCCAGATACCGTGACAGCGGATA
TTTGGGAACCAGGTTTAATCATGGTTGGTTTATCACTAGCATCTTTTGCCTCTGCTATATTGGTAGGTTTTTTTGCTGCA
CGTATTGCTGCAAGTTTAACTGCCCGTATTCGTGGGGAAGTGTTTGATAAAGTCATGAGCTATTCAGCCAATGAAATCAA
CCAATTTTCAGTGCCAAGTTTAGTGACGCGTTCTACCAATGACTTGACCCAAATCCAAATGTTGATTGCTTTAGGACTAC
AAGTCGTTTTACGGGGACCAATCATGTCCATTTGGGCGATTGCGAAAATTTCCGGTCAAAACTGGCAATGGTCAATGACA
ACTGCTGTCGCTGTGGGTGTTTTATTAGTGATGATTGGATTTATCATGTACTTCGCTGTCCCTCGTTTCAGCAAAATCCA
AACCCTGACCGATAATTTAAATGCCGTGACTCGTGAAAACTTAACTGGTTTACGCGTTATTAGAGCTTACAATGCAGAAG
AATATCAAAATGAAAAATTCGCAAAAGCTAATGACGACTTAACCAATACACAACTCTTTGTTAACCGTGTAATGGGGATT
ATGCAACCCGGTATGACCCTTGTATCCAGCAGTTTAACCCTAGTAGTGTACTGGTCAGGTGCTTACTTAATCGCCGATGC
AGCGCAAGGAACAGCGCAAATTAACTTATTCTCAGACATGGTTGTCTTCTCATCTTACGCCATGCAAGTCATCATCGGAT
TTCTGTTGATGGTCATGATCTTCATGATTTTACCGCGTGCCATCGTTTCGGCAAAACGGATCAACGAAGTGCTTTATCTA
GCACCATCCATTGATTTTAAAGAAGATGCGATTCAAACAAGTGAACAAGGATCTGTTGAATTCAAAAACGTCACTTTTAA
ATATGGTGATGATGCCAAACCAGCCCTTAAAGATATCAATTTCAAAATCAACAAGGGTGAAACCTTAGCCATTATCGGAT
CAACTGGTTCAGGTAAATCCACTTTAATCCAAATGATTCCACGTCTATACGACGTATCTGAAGGACAAGTACTTGTCGAC
GGGCATAATGTCAAAGACTTTGACCACGCTGGCTTGAATAATATTGTTGGCTACATGCCACAAAAACCAGTTCTATTTTC
AGGCACAATTCGTTCAAACATGAACCTTGGTGAAAGTAACGAACACTTAGAACACCAGTCGCTATCAGACGAAGAAATCT
GGGCGGCCTTAGACACTGCACAAGCAAGAGACTTTGTTGAAGGAGAACCAGACCAATTGGATACCCATGTTGCCCAAGGT
GGTAACAACTTCTCCGGTGGTCAAAAGCAACGTTTAGGGATTGCCCGCGTGCTTGCTCGTAAACCAGAGATTCTAGTCTT
TGATGACTCATTCTCTGCTTTGGACTACCAGACAGATAAGACCTTGCGTGGCGTTTTAGCAGAACGTATGGCTGACACCA
CTAAGATCATTGTAGCCCAACGTATTTCAACTATTATGGATGCGAACGAGATTTTAGTACTAGATAGAGGCGAAATTGTT
GGCCGCGGTACACACCAAGAATTATTAGCGGACAACAAGGTATACCAAGAAATTGCTTATTCACAATTATCAGAGGAGGA
ATTAGCAAATGACTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(18-290)

ABC transporter (ABC_tran)

(356-510)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

55.98

100

0.57

Multiple sequence alignment