Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   AWM74_RS01210 Genome accession   NZ_CP014162
Coordinates   262190..263953 (-) Length   587 a.a.
NCBI ID   WP_026466288.1    Uniprot ID   A0AAC9F3N5
Organism   Aerococcus urinaeequi strain CCUG28094     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 257190..268953
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AWM74_RS09610 - 258105..258263 (-) 159 WP_418149152.1 alpha/beta hydrolase-fold protein -
  AWM74_RS01175 (AWM74_01175) - 258510..258698 (-) 189 Protein_237 hypothetical protein -
  AWM74_RS01180 (AWM74_01180) - 258760..259128 (+) 369 WP_026466285.1 winged helix-turn-helix transcriptional regulator -
  AWM74_RS01185 (AWM74_01185) - 259278..259538 (-) 261 WP_016896863.1 metal-sensitive transcriptional regulator -
  AWM74_RS01190 (AWM74_01190) - 259538..259834 (-) 297 WP_026466286.1 rhodanese-like domain-containing protein -
  AWM74_RS01195 (AWM74_01195) - 259834..261486 (-) 1653 WP_026466287.1 FAD-dependent oxidoreductase -
  AWM74_RS01200 (AWM74_01200) - 261486..261791 (-) 306 WP_003141799.1 rhodanese-like domain-containing protein -
  AWM74_RS09505 (AWM74_01205) - 261813..261998 (-) 186 WP_034258245.1 membrane protein insertion efficiency factor YidD -
  AWM74_RS01210 (AWM74_01210) rcrQ 262190..263953 (-) 1764 WP_026466288.1 ABC transporter ATP-binding protein Regulator
  AWM74_RS01215 (AWM74_01215) rcrP 263946..265721 (-) 1776 WP_026466289.1 ABC transporter ATP-binding protein Regulator
  AWM74_RS01220 (AWM74_01220) - 265750..266199 (-) 450 WP_026466290.1 MarR family winged helix-turn-helix transcriptional regulator -
  AWM74_RS01225 (AWM74_01225) purD 266461..267714 (-) 1254 WP_026466291.1 phosphoribosylamine--glycine ligase -

Sequence

Protein


Download         Length: 587 a.a.        Molecular weight: 64773.28 Da        Isoelectric Point: 4.5210

>NTDB_id=169012 AWM74_RS01210 WP_026466288.1 262190..263953(-) (rcrQ) [Aerococcus urinaeequi strain CCUG28094]
MTKKKDANQPSLMANIMTYAREYKWPFVAAVVLAMIGSISSIIGPDRLGDMTDKITEGLMSPDGIDLERISQIAITLVVI
YVLGAVFTYIQTFLMATIIQNFSKKLRKNVSDKIDRLTLRYFDSHSHGDTLSRVTNDLDLVGQSLNQTMPSFIPSVTLLI
GTLVMMFYNNAILTLVALVSVVIGFAGIVLILGRSQGYFISQQKNLANVNSIAEESYTGQSVLTTINARNQMTETFSEAN
EALYDSVWHAQFLSGIMQPLMQFIGNFGYVAVSVVGSIMALNGDITFGVIVSFMVYVRMFTQPLGQLSQSFASFQSASAA
LNRVFEFLNEEEMVEETNLLSELPDVHGDVTFEHVNFGYEADQPIIKDFSITAKSGQKIAIVGPTGAGKTTIVNLLMKFY
PIDSGEIYIDGKPTSEISRAAVHDQFSMVLQDTWLFEGTIRENLIFNQDHITDEMVESAAAAVGIDHFINTLPKGYDTVL
DDSVTLSVGQKQLFTIARALLKDAPLLILDEATSSVDTRTEVLLQEAMDKLMEGRTSFVIAHRLSTIRNADIILVMDHGN
IIEQGNHEALMAEGGFYADLYNSQFAK

Nucleotide


Download         Length: 1764 bp        

>NTDB_id=169012 AWM74_RS01210 WP_026466288.1 262190..263953(-) (rcrQ) [Aerococcus urinaeequi strain CCUG28094]
ATGACTAAGAAAAAAGATGCAAATCAACCTTCATTGATGGCGAATATTATGACATATGCGCGTGAATACAAATGGCCGTT
CGTTGCAGCGGTTGTCCTAGCCATGATTGGTTCTATATCGTCTATTATCGGTCCCGACCGGTTAGGGGATATGACAGATA
AAATCACGGAAGGCTTGATGTCACCAGATGGGATTGACTTAGAGCGTATTTCACAAATTGCAATTACTTTAGTGGTTATC
TATGTCCTTGGGGCTGTCTTCACTTATATTCAAACCTTCTTGATGGCAACGATTATTCAAAACTTTTCAAAAAAATTACG
GAAGAATGTATCCGATAAAATTGACCGTTTGACTTTACGCTATTTTGATAGCCATAGTCACGGGGATACCTTAAGTCGGG
TAACCAACGACTTGGACTTGGTTGGACAATCACTTAACCAAACCATGCCGTCATTTATCCCATCAGTGACTTTACTGATT
GGTACCCTAGTGATGATGTTCTACAACAACGCGATTCTAACCCTAGTAGCCTTGGTTTCTGTGGTTATTGGTTTCGCAGG
AATTGTCCTCATTCTAGGTCGTTCTCAAGGTTATTTCATTTCACAACAAAAAAATCTAGCCAATGTGAACAGTATTGCTG
AAGAGTCATACACTGGTCAAAGTGTTTTAACAACTATTAACGCCCGTAACCAAATGACTGAAACCTTCAGCGAAGCGAAC
GAAGCTTTATATGATAGCGTTTGGCATGCCCAATTCTTGTCAGGTATCATGCAACCGTTGATGCAATTCATCGGAAACTT
TGGTTATGTAGCTGTCTCTGTTGTCGGTTCAATTATGGCCTTAAATGGCGACATTACCTTCGGGGTAATTGTATCATTCA
TGGTTTACGTCCGTATGTTCACTCAACCACTAGGTCAATTATCACAATCATTCGCCTCATTCCAATCTGCGTCAGCAGCC
TTAAATCGTGTATTTGAGTTTCTAAATGAAGAGGAAATGGTAGAAGAAACAAACCTATTGAGCGAATTGCCGGATGTCCA
CGGTGACGTGACTTTCGAACACGTAAACTTCGGTTATGAAGCAGATCAACCGATTATCAAAGACTTCTCAATAACCGCTA
AATCAGGTCAGAAGATTGCTATCGTAGGACCTACCGGAGCTGGGAAAACGACAATCGTCAACTTGCTGATGAAATTCTAT
CCAATCGACTCAGGTGAAATTTACATTGATGGGAAACCTACCAGTGAAATTTCACGTGCAGCTGTCCACGACCAATTCTC
AATGGTGTTACAAGATACTTGGTTATTTGAAGGCACCATTCGTGAGAACTTAATCTTCAACCAAGACCACATTACCGATG
AAATGGTTGAATCAGCAGCTGCTGCAGTAGGTATTGACCACTTTATCAATACATTACCGAAAGGCTATGATACTGTATTA
GACGACTCTGTAACCTTATCAGTAGGGCAAAAACAATTATTTACCATTGCACGTGCCTTGTTGAAAGATGCACCTTTATT
GATATTAGATGAAGCGACATCTTCAGTCGATACACGTACAGAAGTCTTACTACAAGAAGCCATGGACAAATTGATGGAAG
GTAGAACATCATTCGTGATCGCCCACCGTTTATCAACTATCCGTAACGCTGATATTATCTTAGTTATGGACCACGGTAAT
ATCATTGAACAAGGTAACCATGAGGCTTTAATGGCTGAGGGTGGCTTCTATGCGGATCTTTATAACAGTCAGTTTGCAAA
ATAG

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(29-304)

ABC transporter (ABC_tran)

(367-514)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

60

98.807

0.593

Multiple sequence alignment