Detailed information NTG0168985

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: CJJRM3420_RS05585
• Genome accession: NZ_CP017456
• Coordinates: 1084074..1085033 (+)
• Length: 319 a.a.
• NCBI ID: WP_002856368.1
• Uniprot ID: -
• Organism: Campylobacter jejuni subsp. jejuni str. RM3420
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1079074..1090033

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CJJRM3420_RS05560 (CjjRM3420_1096)	neuB	1079573..1080613 (+)	1041	WP_002870496.1	N-acetylneuraminate synthase	-
CJJRM3420_RS05565 (CjjRM3420_1097)	neuC	1080610..1081728 (+)	1119	WP_002911676.1	UDP-N-acetylglucosamine 2-epimerase	-
CJJRM3420_RS05570 (CjjRM3420_1098)	-	1081725..1082390 (+)	666	WP_002855897.1	cytidylyltransferase domain-containing protein	-
CJJRM3420_RS05575 (CjjRM3420_1099)	-	1082378..1083211 (+)	834	WP_002855772.1	CatB-related O-acetyltransferase	-
CJJRM3420_RS05580 (CjjRM3420_1100)	waaV	1083203..1084015 (-)	813	WP_002856066.1	glycosyltransferase family 2 protein	-
CJJRM3420_RS05585 (CjjRM3420_1101)	waaF	1084074..1085033 (+)	960	WP_002856368.1	lipopolysaccharide heptosyltransferase II	Regulator
CJJRM3420_RS05590 (CjjRM3420_1102)	gmhA	1085014..1085574 (-)	561	WP_002855785.1	D-sedoheptulose 7-phosphate isomerase	-
CJJRM3420_RS05595 (CjjRM3420_1103)	rfaE1	1085571..1086965 (-)	1395	WP_032581686.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
CJJRM3420_RS05600 (CjjRM3420_1104)	rfaD	1086958..1087911 (-)	954	WP_002856483.1	ADP-glyceromanno-heptose 6-epimerase	-
CJJRM3420_RS05605 (CjjRM3420_1105)	gmhB	1087912..1088472 (-)	561	WP_002911679.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
CJJRM3420_RS05610 (CjjRM3420_1106)	-	1088554..1088856 (+)	303	WP_002852762.1	c-type cytochrome	-
CJJRM3420_RS05615 (CjjRM3420_1107)	ccoS	1088879..1089085 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36719.17 Da
• Isoelectric Point: 10.1941

>NTDB_id=168985 CJJRM3420_RS05585 WP_002856368.1 1084074..1085033(+) (waaF) [Campylobacter jejuni subsp. jejuni str. RM3420]
MKIFIHLPTWLGDAVMASPALYAIKEHFKDAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLDIKAHFKDLKLPFKLKFQNPLILKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTNFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=168985 CJJRM3420_RS05585 WP_002856368.1 1084074..1085033(+) (waaF) [Campylobacter jejuni subsp. jejuni str. RM3420]
ATGAAAATTTTTATACACCTTCCAACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
CTTTAAAGATGCCCAGTTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGTTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTCAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGACATAAAAGCTCATTTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCCACAAATTTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTACATTTAGATCTAGCTTGCATGCCTTGTATGCAAAAAACCTGTCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (95-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	95.611	100	0.956