Detailed information NTG0168760

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: AWB63_RS09035
• Genome accession: NZ_CP014144
• Coordinates: 1969796..1970188 (-)
• Length: 130 a.a.
• NCBI ID: WP_002885697.1
• Uniprot ID: A0AB33ZFB8
• Organism: Streptococcus salivarius strain JF
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1964796..1975188

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AWB63_RS08995 (AWB63_08995)	dapD	1964875..1965573 (-)	699	WP_002886999.1	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	-
AWB63_RS09000 (AWB63_09000)	-	1965659..1966411 (-)	753	WP_038676849.1	HAD family hydrolase	-
AWB63_RS09005 (AWB63_09005)	-	1966525..1967364 (-)	840	WP_038676851.1	methyltransferase domain-containing protein	-
AWB63_RS09015 (AWB63_09015)	-	1967786..1967944 (+)	159	WP_038676853.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
AWB63_RS09020 (AWB63_09020)	-	1967964..1968131 (+)	168	WP_002885883.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
AWB63_RS09025 (AWB63_09025)	-	1968179..1968433 (+)	255	WP_038676855.1	hypothetical protein	-
AWB63_RS09030 (AWB63_09030)	tadA	1968518..1969036 (-)	519	WP_049553956.1	tRNA adenosine(34) deaminase TadA	-
AWB63_RS09035 (AWB63_09035)	ssbA	1969796..1970188 (-)	393	WP_002885697.1	single-stranded DNA-binding protein	Machinery gene
AWB63_RS09040 (AWB63_09040)	-	1970617..1971294 (-)	678	WP_002887005.1	CPBP family intramembrane glutamic endopeptidase	-
AWB63_RS09045 (AWB63_09045)	ytpR	1971561..1972184 (-)	624	WP_002885779.1	YtpR family tRNA-binding protein	-
AWB63_RS09050 (AWB63_09050)	-	1972216..1972740 (-)	525	WP_002885713.1	hypothetical protein	-
AWB63_RS09055 (AWB63_09055)	-	1972744..1973058 (-)	315	WP_002887006.1	thioredoxin family protein	-
AWB63_RS09060 (AWB63_09060)	-	1973055..1973339 (-)	285	WP_038677057.1	DUF4651 domain-containing protein	-
AWB63_RS09065 (AWB63_09065)	pepA	1973439..1974506 (+)	1068	WP_002887007.1	glutamyl aminopeptidase	-

Sequence

Protein

• Length: 130 a.a.
• Molecular weight: 14759.67 Da
• Isoelectric Point: 5.9275

>NTDB_id=168760 AWB63_RS09035 WP_002885697.1 1969796..1970188(-) (ssbA) [Streptococcus salivarius strain JF]
MYNKVILIGRLTATPEMVKTASDRSFTRVTVAVNRRYKTQNGEREADFITVVVWGRLAETLASYASKGSLISLDGELRTR
KYDKDGQTHYVTEVLCSSFQLLESRAQRAVRENNPDNDLADLVLEEELPF

Nucleotide

• Length: 393 bp

>NTDB_id=168760 AWB63_RS09035 WP_002885697.1 1969796..1970188(-) (ssbA) [Streptococcus salivarius strain JF]
ATGTATAACAAAGTTATTTTAATTGGACGTTTGACGGCGACTCCTGAAATGGTAAAAACTGCTAGCGATAGGTCTTTTAC
ACGTGTTACAGTTGCGGTTAATCGTCGCTATAAGACGCAAAATGGTGAGCGTGAGGCTGACTTTATTACAGTGGTTGTCT
GGGGGCGTTTGGCTGAGACCTTAGCATCTTATGCTAGCAAGGGGAGTTTAATTTCTCTTGATGGTGAGCTTCGTACTCGT
AAGTACGATAAGGATGGTCAAACTCATTACGTTACTGAAGTGCTTTGTTCCTCTTTCCAACTTCTGGAGAGTCGTGCTCA
GCGTGCTGTTAGGGAAAATAATCCTGATAATGACTTGGCTGACCTCGTCTTGGAAGAAGAACTTCCCTTCTAG

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	80.916	100	0.815
ssbB/cilA	Streptococcus pneumoniae TIGR4	76.336	100	0.769
ssbB	Streptococcus sobrinus strain NIDR 6715-7	76.336	100	0.769
ssbB/cilA	Streptococcus mitis SK321	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae R6	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae Rx1	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae D39	75.573	100	0.762
ssbB/cilA	Streptococcus mitis NCTC 12261	74.046	100	0.746
ssbB	Lactococcus lactis subsp. cremoris KW2	61.607	86.154	0.531
ssbA	Bacillus subtilis subsp. subtilis str. 168	48.113	81.538	0.392
ssb	Latilactobacillus sakei subsp. sakei 23K	47.17	81.538	0.385