Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   AWB63_RS02025 Genome accession   NZ_CP014144
Coordinates   396708..397151 (-) Length   147 a.a.
NCBI ID   WP_002885568.1    Uniprot ID   A0A0A1DW04
Organism   Streptococcus salivarius strain JF     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 391708..402151
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AWB63_RS02010 (AWB63_02010) - 392391..393014 (-) 624 WP_037599568.1 GNAT family N-acetyltransferase -
  AWB63_RS02015 (AWB63_02015) rcrQ 393122..394900 (-) 1779 WP_038675389.1 ABC transporter ATP-binding protein Regulator
  AWB63_RS02020 (AWB63_02020) rcrP 394890..396704 (-) 1815 WP_038675388.1 ABC transporter ATP-binding protein Regulator
  AWB63_RS02025 (AWB63_02025) rcrR 396708..397151 (-) 444 WP_002885568.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  AWB63_RS02030 (AWB63_02030) - 397337..397747 (-) 411 WP_038675386.1 peptide deformylase -
  AWB63_RS02035 (AWB63_02035) - 397905..399446 (-) 1542 WP_223896503.1 YfhO family protein -
  AWB63_RS02040 (AWB63_02040) gdhA 399727..401079 (-) 1353 WP_002885547.1 NADP-specific glutamate dehydrogenase -

Sequence

Protein


Download         Length: 147 a.a.        Molecular weight: 17181.67 Da        Isoelectric Point: 9.3639

>NTDB_id=168724 AWB63_RS02025 WP_002885568.1 396708..397151(-) (rcrR) [Streptococcus salivarius strain JF]
MHGKDTFSEFREFINTMESRVQELGKVHGVEHLAGPQGFAVKYLSDNQDKEIFIKDIEKRLCISKSVASNLVKRMEKNGF
VELVTSDKDKRYKYVHLTDLGKKKARDVKHFREAIHEQLLEGISKEDAETAFRVFHQIRMNLEKNKE

Nucleotide


Download         Length: 444 bp        

>NTDB_id=168724 AWB63_RS02025 WP_002885568.1 396708..397151(-) (rcrR) [Streptococcus salivarius strain JF]
ATGCATGGAAAAGATACTTTTAGTGAATTCAGAGAATTCATCAATACTATGGAATCTCGCGTGCAAGAGTTAGGAAAGGT
CCATGGGGTTGAGCATTTAGCTGGCCCTCAAGGATTTGCTGTCAAGTATTTGTCTGACAATCAAGATAAAGAAATCTTTA
TCAAAGACATTGAAAAAAGACTATGTATTTCTAAATCAGTGGCTAGTAATTTGGTCAAACGAATGGAAAAAAATGGTTTT
GTTGAGTTGGTGACATCGGACAAGGATAAACGCTACAAGTATGTTCATCTGACAGACTTAGGTAAAAAGAAAGCTCGAGA
TGTCAAACATTTTCGAGAGGCCATCCATGAACAGCTGTTAGAAGGTATTTCCAAAGAAGATGCTGAAACAGCCTTTCGTG
TCTTTCACCAAATTCGTATGAATTTAGAAAAAAATAAGGAGTAA

Domains

Predicted by InterproScan.

MarR family (MarR_2)

(37-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0A1DW04

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

58.156

95.918

0.558

Multiple sequence alignment