Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | AV541_RS00945 | Genome accession | NZ_CP014141 |
| Coordinates | 166260..166568 (-) | Length | 102 a.a. |
| NCBI ID | WP_060384031.1 | Uniprot ID | A0A0X8D7U8 |
| Organism | Thermus parvatiensis strain RL | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 161260..171568
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AV541_RS00925 (AV541_00925) | rsmG | 161944..162693 (+) | 750 | WP_060384029.1 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | - |
| AV541_RS00930 (AV541_00930) | soj | 162687..163436 (+) | 750 | WP_060384030.1 | chromosome-partitioning ATPase Soj | - |
| AV541_RS00935 (AV541_00935) | - | 163420..164228 (+) | 809 | Protein_176 | ParB/RepB/Spo0J family partition protein | - |
| AV541_RS00940 (AV541_00940) | - | 164216..166273 (-) | 2058 | Protein_177 | ComEC/Rec2 family competence protein | - |
| AV541_RS00945 (AV541_00945) | comEA | 166260..166568 (-) | 309 | WP_060384031.1 | ComEA family DNA-binding protein | Machinery gene |
| AV541_RS00950 (AV541_00950) | - | 166541..167203 (-) | 663 | WP_008633955.1 | hypothetical protein | - |
| AV541_RS00955 (AV541_00955) | - | 167226..167855 (+) | 630 | WP_038035668.1 | glycerophosphodiester phosphodiesterase | - |
| AV541_RS00960 (AV541_00960) | - | 167866..168393 (+) | 528 | WP_060384032.1 | inorganic diphosphatase | - |
| AV541_RS00965 (AV541_00965) | - | 168457..168951 (+) | 495 | WP_060384033.1 | hypothetical protein | - |
| AV541_RS00970 (AV541_00970) | rsmI | 168953..169750 (+) | 798 | WP_060384034.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| AV541_RS00975 (AV541_00975) | pfkA | 169747..170715 (+) | 969 | WP_060384035.1 | 6-phosphofructokinase | - |
| AV541_RS11860 | - | 170692..170973 (-) | 282 | WP_244880553.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 102 a.a. Molecular weight: 11069.15 Da Isoelectric Point: 9.6946
>NTDB_id=168667 AV541_RS00945 WP_060384031.1 166260..166568(-) (comEA) [Thermus parvatiensis strain RL]
MVLGYLLAVALLGLWALWPKVAPRPAPVQVVAMVEASFTPPPPEPVSLNAASLEDLEALPGIGPTLARRIVEGRPYRQVE
DLLRVKGIGPATLERLRPYVRP
MVLGYLLAVALLGLWALWPKVAPRPAPVQVVAMVEASFTPPPPEPVSLNAASLEDLEALPGIGPTLARRIVEGRPYRQVE
DLLRVKGIGPATLERLRPYVRP
Nucleotide
Download Length: 309 bp
>NTDB_id=168667 AV541_RS00945 WP_060384031.1 166260..166568(-) (comEA) [Thermus parvatiensis strain RL]
GTGGTCCTTGGCTACCTCCTCGCAGTAGCCCTCCTGGGGCTTTGGGCCCTCTGGCCCAAAGTGGCCCCCAGGCCTGCTCC
GGTCCAGGTGGTGGCCATGGTGGAGGCCTCCTTTACCCCTCCGCCCCCTGAGCCCGTGAGCCTGAACGCCGCCAGCCTCG
AGGACCTGGAGGCCCTGCCGGGTATCGGCCCCACCCTGGCGCGCCGGATCGTGGAGGGAAGGCCCTACCGCCAGGTGGAA
GACCTCCTGCGGGTGAAGGGGATCGGCCCCGCCACCCTGGAGCGCCTGCGGCCCTATGTCCGGCCCTGA
GTGGTCCTTGGCTACCTCCTCGCAGTAGCCCTCCTGGGGCTTTGGGCCCTCTGGCCCAAAGTGGCCCCCAGGCCTGCTCC
GGTCCAGGTGGTGGCCATGGTGGAGGCCTCCTTTACCCCTCCGCCCCCTGAGCCCGTGAGCCTGAACGCCGCCAGCCTCG
AGGACCTGGAGGCCCTGCCGGGTATCGGCCCCACCCTGGCGCGCCGGATCGTGGAGGGAAGGCCCTACCGCCAGGTGGAA
GACCTCCTGCGGGTGAAGGGGATCGGCCCCGCCACCCTGGAGCGCCTGCGGCCCTATGTCCGGCCCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Thermus thermophilus HB27 |
75.49 |
100 |
0.755 |
| comEA | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
44.444 |
100 |
0.471 |