Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACH33_RS04740 Genome accession   NZ_CP014140
Coordinates   974214..975167 (+) Length   317 a.a.
NCBI ID   WP_057900457.1    Uniprot ID   A0A1G7YFC1
Organism   Aneurinibacillus sp. XH2     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 969214..980167
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACH33_RS04720 (ACH33_04725) aceA 970588..971868 (+) 1281 WP_057897995.1 isocitrate lyase -
  ACH33_RS18555 yhfH 971965..972090 (+) 126 WP_082705893.1 protein YhfH -
  ACH33_RS04725 (ACH33_04730) - 972317..972703 (+) 387 WP_139184918.1 CidA/LrgA family protein -
  ACH33_RS04730 (ACH33_04735) - 972696..973385 (+) 690 WP_057897997.1 LrgB family protein -
  ACH33_RS04735 (ACH33_04740) - 973501..973881 (+) 381 WP_082705894.1 sigma-70 family RNA polymerase sigma factor -
  ACH33_RS04740 (ACH33_04745) ceuB 974214..975167 (+) 954 WP_057900457.1 ABC transporter permease Machinery gene
  ACH33_RS04745 (ACH33_04750) - 975157..976107 (+) 951 WP_057900458.1 iron chelate uptake ABC transporter family permease subunit -
  ACH33_RS04750 (ACH33_04755) - 976101..976859 (+) 759 WP_057900459.1 ABC transporter ATP-binding protein -
  ACH33_RS04755 (ACH33_04760) - 977175..978125 (+) 951 WP_057900460.1 siderophore ABC transporter substrate-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35271.77 Da        Isoelectric Point: 10.1013

>NTDB_id=168648 ACH33_RS04740 WP_057900457.1 974214..975167(+) (ceuB) [Aneurinibacillus sp. XH2]
MKKRYLFITLIVLSFISIFIGVKDISPLDIFDLTDDKAQILLVSRLPRLISIIIAGVSMSICGLIMQQLSRNKFVSPTTA
GTMDSARLGILVSLMIFTTASPLQKMLVAFIFALLGTFLFMKILEKIKFKDTIFIPLVGLMFGNIISSISTFFAYKYDLI
QNMSSWLQGDFSMIMKGRYELLYISIPLLIIAYVFANKFTVAGMGEDFSKNLGLNYKQVVNIGLIIVALMTSSVVLTVGM
IPFLGLIIPNIVTIYRGDHLKKSLSHTALLGAVFVLFCDILGRIVIYPYEISISLTVGIIGSGIFVYLLMRRKAYGL

Nucleotide


Download         Length: 954 bp        

>NTDB_id=168648 ACH33_RS04740 WP_057900457.1 974214..975167(+) (ceuB) [Aneurinibacillus sp. XH2]
ATGAAAAAAAGATATTTATTTATTACACTCATTGTTTTGTCATTCATTTCTATTTTTATTGGTGTAAAAGATATATCACC
TTTAGATATTTTTGATTTAACGGACGATAAAGCTCAAATTTTATTGGTAAGCAGGCTTCCTCGTCTTATTAGCATTATTA
TTGCCGGCGTAAGTATGAGTATATGCGGCTTAATTATGCAACAGCTAAGCAGGAATAAGTTCGTATCTCCGACTACGGCT
GGAACGATGGATTCCGCCAGATTAGGAATTTTGGTTTCCTTAATGATATTCACGACGGCGAGTCCTTTGCAAAAGATGCT
CGTTGCTTTTATCTTTGCGTTGCTTGGAACGTTTCTGTTTATGAAAATTTTAGAGAAGATAAAATTCAAAGATACTATTT
TCATACCGTTGGTAGGATTGATGTTTGGTAATATTATCAGCTCCATATCGACTTTTTTTGCTTACAAGTATGATTTAATT
CAGAATATGTCTTCATGGTTACAAGGTGATTTTTCAATGATTATGAAAGGCCGATATGAGCTTTTGTATATTAGTATTCC
TTTGCTCATCATCGCCTATGTTTTTGCCAATAAATTTACTGTAGCAGGAATGGGCGAGGATTTTTCAAAAAATTTGGGGC
TGAACTATAAGCAAGTGGTAAATATAGGATTGATTATTGTAGCCTTAATGACATCTTCAGTAGTACTGACAGTAGGGATG
ATTCCTTTTCTAGGCCTTATTATCCCGAACATTGTCACGATATACCGAGGCGATCATTTGAAAAAAAGTCTTTCTCATAC
AGCTTTATTAGGGGCGGTATTTGTCCTGTTCTGTGACATACTCGGTCGTATCGTTATCTATCCGTACGAGATTTCAATCA
GTCTTACAGTTGGAATCATAGGAAGTGGTATTTTTGTTTATCTACTGATGAGGAGAAAGGCATATGGGTTATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1G7YFC1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

55.7

96.845

0.539

Multiple sequence alignment