Detailed information NTG0168593

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: AL468_RS21715
• Genome accession: NZ_CP014134
• Coordinates: 2597614..2601000 (-)
• Length: 1128 a.a.
• NCBI ID: WP_104974833.1
• Uniprot ID: -
• Organism: Vibrio diabolicus strain FDAARGOS_99
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2592614..2606000

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AL468_RS21700 (AL468_13115)	-	2592969..2593994 (-)	1026	WP_005394707.1	ABC transporter permease	-
AL468_RS21705 (AL468_13120)	-	2593997..2594983 (-)	987	WP_005394705.1	ABC transporter permease	-
AL468_RS21710 (AL468_13125)	-	2595154..2596836 (-)	1683	WP_005394703.1	ABC transporter substrate-binding protein	-
AL468_RS21715 (AL468_13130)	chiS	2597614..2601000 (-)	3387	WP_104974833.1	response regulator	Regulator
AL468_RS21720 (AL468_13135)	rsmC	2601227..2602252 (-)	1026	WP_104974834.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
AL468_RS21725 (AL468_13140)	-	2602328..2603413 (-)	1086	WP_006743285.1	AI-2E family transporter	-
AL468_RS21730 (AL468_13145)	hemL	2603760..2605055 (-)	1296	WP_012841437.1	glutamate-1-semialdehyde 2,1-aminomutase	-
AL468_RS21735 (AL468_13150)	erpA	2605302..2605643 (+)	342	WP_005380031.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127006.64 Da
• Isoelectric Point: 5.5568

>NTDB_id=168593 AL468_RS21715 WP_104974833.1 2597614..2601000(-) (chiS) [Vibrio diabolicus strain FDAARGOS_99]
MFKFYKKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQIIDYFEARETEVMGFVRS
ELAYASGGRFYGLVNAFSRLGNDIEESRKNAQQRYIEGSGDQIKTSTLPESSNYVGSERYRLLHKRYHWAYLELLKRSDF
NDILLVDINGNVTYSINKDDNYGTNLLSGPYKDSALGKTFKRLADDVTERRKVNEDYTPVIVSDFELEGGKQVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLAADANRESSINTLLVGNDHQPRTINTKQDDIKNSLEVIDKALSGAFGVGTYTNGLGEE
IIAAYAPIETRGVIWALVVQLPENEAFARIHQLEKLFVIAMLIAIILVVIASHYLSNFITSPLLKLTWAAEKVSAGDLDD
TTFNTVRKDEIGRLALSFERMQRSIREKIQTIKKQNEELESNIQIIQKQNDELQLADKLKDEFLATTSHELRTPLHGMVG
IAETLASGANGAIPASQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSMDIQKSAVSLASATRLVLELSSHLLGNKTIRI
INQVPADLKAVSADPQRLEQVLYNLIGNAIKYTSEGKIVISANVVDDHVRVQVVDTGQGIPAEHLEHIFEPLIQAGQDAS
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASEEEIQTTQTLAAHGHFQIPEIDVENNEDLSLPENPD
GPLLYVADDEPVNLRVLKSFLRLEGYRVRTVSDGPETLALVEQEKPELLLLDIMMPGMSGYQVCSELRETYDHAELPIIM
LTALSQTEDRVRGFEAGANDYLSKPFNKQELAARIQAHLTASQAEMRHMENKILESELRQRAAVEASLLETQGRLLEQLE
SAPEAIICLREDKRIRFANEAACKLFKRNLEQLKRSSADELIAPKYLTVKQPHYCGKIDIYIEDIRQNIEADILKLPEGS
GLDVMYIFNVGGGANAARIHNLETAVEVLSSYAFDGDKDQLQKLKELGGEFTRLADKALGNKKDKQELMREILVDAMTHA
LEYWESVTGESKFAFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEFILEHCKEQSPERAYIEAQRD
KLQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=168593 AL468_RS21715 WP_104974833.1 2597614..2601000(-) (chiS) [Vibrio diabolicus strain FDAARGOS_99]
ATGTTTAAATTCTACAAAAAACAGAAATTTAAGCGCCTTCAGAGTACACTGATGACCGCATTTCTGGTGCTCAGTATCAC
ACCTCTTACTATTACTGCGATCTTTTTCCTACAGTCCCACAGTAAAGATCTGCAAGAACAAAGCACCTCACACTTGTTGT
CTGTTCGAGATACAAAACAACAGCAAATTATCGACTACTTTGAGGCGCGGGAAACCGAAGTCATGGGCTTTGTGCGCTCT
GAACTGGCTTACGCCAGTGGTGGTCGATTCTACGGTCTCGTCAATGCTTTTAGCCGTTTAGGCAATGACATTGAAGAATC
TCGTAAAAATGCCCAACAGCGCTACATTGAAGGCAGCGGAGATCAAATCAAAACGTCAACGTTACCCGAGTCTTCCAACT
ATGTCGGAAGTGAACGTTACCGACTCTTACATAAACGTTACCACTGGGCCTACTTGGAGCTCCTCAAGCGCTCTGATTTT
AATGATATTTTGCTGGTCGATATCAATGGTAATGTCACCTACTCGATCAACAAAGACGATAACTACGGAACAAACTTATT
ATCAGGCCCCTACAAAGACTCAGCACTTGGCAAAACCTTCAAGCGTCTAGCTGATGACGTCACTGAACGCCGTAAGGTGA
ATGAAGACTACACCCCTGTTATTGTGTCTGATTTCGAACTGGAAGGTGGTAAACAAGTCGCTTGGTTAGGTGCTCCAATT
GTTCAGCAAGGCTACCTACACAGCTATGCTATGTTCCGCTTACCAAATAATGGCATCACGAAGTTAGCCGCAGACGCCAA
CCGAGAGTCATCCATTAACACCTTACTGGTTGGAAATGATCACCAACCTCGCACAATTAACACCAAGCAAGATGACATTA
AGAACAGCTTAGAAGTGATCGATAAAGCACTCTCTGGTGCATTTGGCGTCGGCACTTACACGAACGGTTTAGGTGAAGAG
ATCATCGCTGCTTATGCACCGATTGAAACGCGTGGTGTTATTTGGGCACTCGTCGTGCAATTACCAGAAAACGAAGCTTT
CGCTCGTATTCATCAACTAGAAAAACTGTTTGTTATCGCCATGCTAATCGCCATCATTCTAGTGGTAATCGCTTCCCATT
ATTTATCAAACTTTATTACTTCTCCGTTGCTGAAGTTAACTTGGGCTGCCGAAAAAGTGTCTGCCGGAGATCTTGATGAC
ACCACCTTTAATACGGTTCGCAAAGATGAAATTGGCCGTCTTGCGCTGAGTTTTGAACGAATGCAACGCTCTATTCGAGA
GAAAATTCAAACCATTAAGAAGCAAAATGAAGAGCTAGAGAGCAACATCCAGATCATTCAAAAACAAAATGATGAACTAC
AATTGGCCGACAAACTTAAAGATGAGTTCTTAGCCACCACTTCTCATGAACTTCGCACACCATTGCACGGCATGGTCGGA
ATCGCTGAGACCTTAGCGTCCGGCGCTAACGGTGCTATCCCTGCTAGCCAAAAATATCAGCTTGATATCATCATTAAAAG
TGGGCAACGTCTCGCAAATCTTGTTGATGACTTATTGGATTATCATAAAATGCGTTACGGAAGCATGGATATCCAGAAGT
CAGCGGTGAGTTTAGCCAGTGCAACGCGACTGGTACTAGAGCTTTCCAGCCATTTACTCGGAAATAAAACCATCCGTATC
ATCAACCAAGTACCAGCGGATTTGAAAGCGGTGTCTGCCGATCCTCAACGCCTTGAACAAGTGTTATATAACCTGATCGG
TAATGCGATTAAGTACACCTCAGAAGGTAAAATCGTTATCTCCGCCAATGTGGTTGATGATCATGTTCGTGTGCAAGTTG
TGGATACTGGGCAAGGTATTCCCGCAGAACATCTTGAACATATTTTCGAACCACTTATCCAAGCAGGGCAAGACGCAAGT
CGCTATCGTCAAGGTGCGGGGCTCGGGCTTTCGATTAGCCGTCAATTGATAGAGTTGATGGGTGGCTCGTTATACGTCAG
CAGCCAGCCTATGGTCGGCACCACCTTCAGTTTCACGTTACCACTTGCCAGTGAAGAAGAGATCCAAACAACTCAAACCC
TTGCAGCACACGGACACTTCCAGATTCCTGAAATCGATGTAGAGAACAATGAAGACTTATCACTACCAGAGAATCCAGAC
GGCCCATTACTTTATGTCGCTGACGATGAGCCAGTAAACTTACGTGTGCTTAAGAGCTTCTTACGTTTAGAGGGCTATCG
CGTACGTACCGTCTCTGATGGACCAGAAACATTAGCACTCGTTGAGCAGGAAAAACCGGAACTCCTGTTATTGGATATCA
TGATGCCAGGCATGAGCGGCTATCAAGTCTGCAGTGAATTACGTGAAACTTATGACCATGCCGAGCTACCTATCATTATG
CTCACCGCGCTTAGTCAAACAGAAGATCGTGTACGAGGCTTTGAAGCAGGAGCCAACGACTATTTATCTAAGCCATTCAA
TAAACAAGAGCTAGCTGCGCGCATCCAAGCGCACTTAACGGCAAGCCAAGCTGAAATGCGCCACATGGAGAATAAGATAC
TTGAATCTGAACTTCGCCAACGAGCGGCTGTAGAGGCAAGCTTATTAGAAACTCAAGGGCGATTGTTGGAACAACTGGAA
TCGGCTCCTGAAGCGATTATCTGTTTGCGTGAAGATAAGCGTATTCGGTTTGCTAATGAAGCTGCTTGCAAGCTATTCAA
GCGTAACTTAGAACAATTAAAACGTTCATCTGCCGATGAGTTGATTGCACCTAAGTATCTGACCGTCAAACAACCTCATT
ACTGTGGCAAGATTGATATCTATATTGAAGATATTCGTCAAAACATCGAAGCAGACATTCTTAAACTACCTGAAGGCTCA
GGCTTAGATGTCATGTATATCTTTAATGTTGGCGGAGGAGCCAATGCCGCTCGCATACACAACCTAGAAACCGCAGTAGA
GGTGCTTTCAAGTTATGCTTTTGATGGCGATAAAGACCAGCTGCAGAAGCTGAAAGAACTCGGTGGAGAGTTTACACGGC
TTGCAGACAAAGCGCTTGGTAACAAAAAAGACAAACAAGAGCTAATGCGAGAAATTCTGGTCGACGCAATGACACATGCC
TTAGAGTATTGGGAGTCAGTCACTGGTGAAAGTAAATTCGCATTTGCCGAACAAAGTGGCTTATGGCGCGTTTATCTTGA
CCGTAGCACTCTGCAAACACGCACTTTGGATAAATACATGCGTATAGAAACTCTGCCGAAAACGCCACGTTGGAGAACGG
TGTTGAGCTCAATAGAATTCATCCTTGAACACTGTAAAGAACAGAGTCCTGAGCGTGCATACATCGAAGCTCAACGAGAT
AAACTACAGCGACTGTTGACCAGCTAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• Response regulator receiver domain (Response_reg) (726-836)

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.439	100	0.765