Detailed information NTG0168324

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: AL552_RS12890
• Genome accession: NZ_CP014094
• Coordinates: 2419179..2422565 (+)
• Length: 1128 a.a.
• NCBI ID: WP_085342662.1
• Uniprot ID: -
• Organism: Vibrio diabolicus strain FDAARGOS_96
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2414179..2427565

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AL552_RS12870 (AL552_21025)	erpA	2414534..2414875 (-)	342	WP_005380031.1	iron-sulfur cluster insertion protein ErpA	-
AL552_RS12875 (AL552_21030)	hemL	2415123..2416418 (+)	1296	WP_012841437.1	glutamate-1-semialdehyde 2,1-aminomutase	-
AL552_RS12880 (AL552_21035)	-	2416765..2417850 (+)	1086	WP_104969764.1	AI-2E family transporter	-
AL552_RS12885 (AL552_21040)	rsmC	2417927..2418952 (+)	1026	WP_005394693.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
AL552_RS12890 (AL552_21045)	chiS	2419179..2422565 (+)	3387	WP_085342662.1	response regulator	Regulator
AL552_RS12895 (AL552_21050)	-	2423338..2425020 (+)	1683	WP_005394703.1	ABC transporter substrate-binding protein	-
AL552_RS12900 (AL552_21055)	-	2425191..2426177 (+)	987	WP_005394705.1	ABC transporter permease	-
AL552_RS12905 (AL552_21060)	-	2426180..2427205 (+)	1026	WP_005394707.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 126980.55 Da
• Isoelectric Point: 5.4346

>NTDB_id=168324 AL552_RS12890 WP_085342662.1 2419179..2422565(+) (chiS) [Vibrio diabolicus strain FDAARGOS_96]
MFKFYKKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQIIDYFEARETEVMGFVRS
ELAYASGGRFYGLVNAFSRLGNDIEESRKNAQQRYIEGSGDQIKTSTLPESSNYVGSERYRLLHKRYHWAYLELLKRSDF
NDILLVDINGNVTYSINKDDNYGTNLLSGPYKDSALGKTFKRLADDVTERRKVNEDYTPVIVSDFELEGGKQVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLAADANRESSINTLLVGNDHQPRTINTKQDDIKNSLEVIDKALSGAFGVGTYTNGLGEE
IIAAYAPIETRGVIWALVVQLPENEAFARIHQLEKLFVIAMLIAIILVVIASHYLSNFITSPLLKLTWAAEKVSAGDLDD
TTFNTVRKDEIGRLALSFERMQRSIREKIQTIKKQNEELESNIQIIQKQNDELQLADKLKDEFLATTSHELRTPLHGMVG
IAETLASGANGAIPASQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSMDIQKSAVSLASATRLVLELSSHLLGNKTIRI
INQVPADLKAVSADPQRLEQVLYNLIGNAIKYTSEGKIVISANVVDDHVRVQVVDTGQGIPAEHLEHIFEPLIQAGQDAS
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASEEEIQTTQTLAAHGHFQIPEIDVENSEDLSLPENPD
GPLLYVADDEPVNLRVLESFLRLEGYRVRTVSDGPETLALVEQEKPELLLLDIMMPGMSGYQVCSELRETYDHAELPIIM
LTALSQTEDRVRGFEAGANDYLSKPFNKQELAARIQAHLTASQAEMRHMENKILESELRQRAAVEASLLETQGRLLEQLE
SAPEAIICLREDKRIRFANEAACKLFKRNLEQLKRSSADELIAPKYLTVKQPHYCGKIDIYIEDIRQNIEADILKLPEGS
GLDVMYIFNVGGGANAARIHNLETAVEVLSSYAFDGDKDQLQKLKELGGEFTRLADKALGNKKDKQELMREILVDAMTHA
LEYWESVTGESKFAFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEFILEHCKEQSPERAYIEAQRD
KLQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=168324 AL552_RS12890 WP_085342662.1 2419179..2422565(+) (chiS) [Vibrio diabolicus strain FDAARGOS_96]
ATGTTTAAATTCTACAAAAAACAGAAATTTAAGCGCCTTCAGAGTACACTGATGACCGCATTTCTGGTGCTCAGTATCAC
ACCTCTTACCATTACTGCGATCTTTTTCCTACAGTCCCACAGTAAAGATCTGCAAGAACAAAGCACCTCACACTTGTTGT
CTGTTCGAGATACAAAACAACAGCAAATTATCGACTACTTTGAGGCGCGGGAAACCGAAGTCATGGGCTTTGTGCGCTCT
GAACTGGCTTACGCCAGTGGTGGTCGATTCTACGGTCTCGTCAATGCTTTTAGTCGTTTAGGTAATGACATTGAAGAATC
TCGTAAAAATGCCCAACAGCGCTACATTGAAGGCAGCGGAGATCAAATCAAAACGTCAACGTTACCCGAGTCTTCCAACT
ATGTCGGAAGTGAACGTTACCGACTCTTACATAAACGTTACCACTGGGCCTACTTGGAGCTCCTCAAGCGCTCTGATTTT
AATGATATTTTGCTGGTCGATATCAACGGTAATGTCACCTACTCGATCAACAAAGACGATAACTACGGAACAAACTTATT
ATCAGGCCCCTACAAAGACTCAGCACTTGGCAAAACCTTCAAGCGTCTAGCTGATGACGTCACTGAACGCCGTAAGGTGA
ATGAAGACTACACCCCTGTGATTGTGTCTGATTTCGAACTGGAAGGTGGTAAACAAGTCGCTTGGTTAGGTGCTCCAATT
GTTCAGCAAGGCTACCTACACAGCTATGCTATGTTCCGCTTACCAAATAATGGCATCACGAAGTTAGCCGCAGACGCCAA
CCGAGAGTCATCCATTAACACCTTACTGGTTGGAAATGATCACCAACCTCGCACAATTAATACCAAGCAAGATGACATTA
AGAACAGCTTAGAAGTGATCGATAAAGCACTCTCTGGTGCATTTGGCGTCGGCACTTACACGAACGGTTTAGGTGAAGAG
ATCATCGCTGCTTATGCACCGATTGAAACGCGTGGTGTTATTTGGGCACTCGTCGTGCAATTACCAGAAAACGAAGCTTT
CGCTCGTATTCATCAACTAGAAAAACTGTTTGTTATCGCCATGCTGATCGCCATCATTCTAGTGGTAATCGCTTCCCATT
ATTTATCAAACTTTATTACTTCTCCGTTGCTGAAGTTAACTTGGGCTGCCGAAAAAGTGTCTGCCGGAGATCTTGATGAC
ACCACCTTTAATACGGTTCGCAAAGATGAAATTGGCCGTCTTGCGCTGAGTTTTGAACGAATGCAACGCTCTATTCGAGA
GAAAATTCAAACCATTAAGAAGCAAAATGAAGAGCTCGAGAGCAACATACAGATCATTCAAAAACAAAATGATGAACTGC
AATTGGCCGACAAACTTAAAGATGAGTTCTTAGCCACCACTTCTCATGAACTCCGCACACCATTGCACGGCATGGTCGGA
ATCGCTGAGACTTTAGCGTCCGGCGCTAACGGTGCTATTCCTGCTAGCCAAAAATATCAGCTTGATATCATCATTAAAAG
TGGGCAACGTCTCGCAAACCTTGTTGATGACTTATTGGATTATCATAAAATGCGTTACGGAAGCATGGATATCCAGAAGT
CAGCGGTGAGTTTAGCCAGTGCAACGCGACTGGTACTAGAGCTTTCCAGCCATTTACTCGGAAATAAAACCATCCGTATC
ATCAACCAAGTACCAGCGGATTTGAAAGCGGTGTCTGCCGATCCTCAACGCCTTGAACAAGTGTTATATAACCTGATCGG
TAATGCGATTAAGTACACCTCTGAAGGTAAAATCGTTATCTCCGCCAATGTGGTTGATGATCATGTTCGTGTGCAAGTTG
TGGATACTGGGCAAGGTATTCCCGCAGAGCATCTTGAACATATTTTCGAACCACTTATCCAAGCAGGACAAGACGCAAGT
CGCTATCGTCAAGGTGCGGGGCTCGGGCTTTCGATTAGCCGTCAATTGATTGAGTTGATGGGTGGCTCGTTATACGTCAG
CAGCCAGCCTATGGTCGGCACCACCTTCAGTTTTACGTTACCACTTGCCAGTGAAGAAGAGATCCAAACAACTCAAACCC
TTGCTGCGCACGGACACTTCCAGATTCCTGAAATCGATGTAGAGAACAGTGAAGACTTATCGCTGCCAGAGAATCCAGAC
GGCCCGTTACTGTATGTCGCTGACGATGAGCCAGTAAACCTGCGTGTGCTTGAGAGCTTCTTACGTTTAGAGGGCTATCG
CGTACGTACCGTCTCTGATGGGCCAGAAACATTAGCACTCGTTGAGCAGGAAAAACCGGAACTCCTATTATTGGATATCA
TGATGCCAGGCATGAGCGGCTATCAAGTCTGCAGTGAATTACGTGAAACTTATGATCATGCCGAGCTACCTATCATTATG
CTCACCGCGCTTAGTCAAACAGAAGATCGTGTACGAGGCTTTGAAGCAGGAGCCAACGACTATTTGTCTAAGCCATTCAA
TAAACAAGAGCTAGCTGCACGAATCCAAGCGCACTTAACGGCAAGCCAAGCAGAAATGCGCCATATGGAGAATAAGATAC
TTGAATCTGAACTTCGCCAACGAGCGGCTGTAGAGGCAAGCTTATTAGAAACTCAAGGGCGATTGTTGGAACAACTGGAA
TCGGCTCCTGAAGCGATTATCTGTTTGCGTGAAGATAAACGTATCCGGTTTGCTAATGAAGCTGCTTGCAAGCTATTCAA
GCGTAACTTAGAACAATTAAAACGTTCATCTGCCGATGAGTTGATTGCACCTAAGTATCTGACCGTCAAACAACCTCATT
ACTGTGGCAAGATTGATATCTATATTGAAGATATTCGTCAAAACATCGAAGCAGACATTCTTAAACTACCTGAAGGCTCA
GGCTTAGATGTCATGTATATCTTTAATGTTGGCGGAGGAGCCAATGCCGCTCGCATACACAACCTAGAAACCGCAGTAGA
GGTGCTTTCAAGTTATGCTTTTGATGGCGATAAAGACCAGCTGCAGAAGCTGAAAGAACTCGGTGGAGAGTTTACACGCC
TTGCAGACAAAGCGCTTGGTAACAAAAAAGACAAACAAGAGCTAATGCGAGAAATTCTGGTCGACGCAATGACACATGCC
TTAGAGTATTGGGAGTCAGTCACTGGTGAAAGTAAATTCGCATTTGCCGAACAAAGTGGCTTATGGCGCGTTTATCTTGA
CCGTAGCACTCTGCAAACACGCACTTTGGATAAATACATGCGTATAGAAACGCTGCCAAAAACGCCACGTTGGAGAACGG
TATTGAGCTCGATAGAATTCATCCTTGAACACTGTAAAGAACAGAGTCCTGAGCGTGCGTACATCGAAGCTCAACGAGAT
AAACTACAGCGACTGTTGACCAGCTAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• HAMP domain (HAMP) (375-427)

• Response regulator receiver domain (Response_reg) (726-836)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.439	100	0.765