Detailed information NTG0168311

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AL552_RS01520
• Genome accession: NZ_CP014094
• Coordinates: 160345..161352 (-)
• Length: 335 a.a.
• NCBI ID: WP_005379543.1
• Uniprot ID: -
• Organism: Vibrio diabolicus strain FDAARGOS_96
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 155345..166352

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AL552_RS01495 (AL552_09655)	rraA	155426..155932 (-)	507	WP_005397954.1	ribonuclease E activity regulator RraA	-
AL552_RS01500 (AL552_09660)	-	156009..156926 (-)	918	WP_104969015.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AL552_RS01505 (AL552_09665)	hslU	157568..158899 (-)	1332	WP_006742475.1	HslU--HslV peptidase ATPase subunit	-
AL552_RS01510 (AL552_09670)	hslV	158923..159474 (-)	552	WP_005383176.1	ATP-dependent protease subunit HslV	-
AL552_RS01515 (AL552_09675)	ftsN	159590..160129 (-)	540	WP_104969016.1	cell division protein FtsN	-
AL552_RS01520 (AL552_09680)	cytR	160345..161352 (-)	1008	WP_005379543.1	DNA-binding transcriptional regulator CytR	Regulator
AL552_RS01525 (AL552_09685)	priA	161674..163875 (-)	2202	WP_104969017.1	primosomal protein N'	-
AL552_RS01535 (AL552_09695)	rpmE	164171..164392 (+)	222	WP_005379546.1	50S ribosomal protein L31	-
AL552_RS01540 (AL552_09700)	rpsJ	164847..165158 (+)	312	WP_004410492.1	30S ribosomal protein S10	-
AL552_RS01545 (AL552_09705)	rplC	165173..165802 (+)	630	WP_005379555.1	50S ribosomal protein L3	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36892.42 Da
• Isoelectric Point: 6.2447

>NTDB_id=168311 AL552_RS01520 WP_005379543.1 160345..161352(-) (cytR) [Vibrio diabolicus strain FDAARGOS_96]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDTAILCQFRQQGYQQALRRAGINKDPQYSVITEFSFDGGAKAVRKLLELPEPPTA
IFCHCDTMAIGAIQEAKKLGLRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAMLMMLEMLKGHDVHSGSRLLE
TNLVIRGSAAPPQRP

Nucleotide

• Length: 1008 bp

>NTDB_id=168311 AL552_RS01520 WP_005379543.1 160345..161352(-) (cytR) [Vibrio diabolicus strain FDAARGOS_96]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTGTCTACGGCTACGGTATCTCGAGCATTAATGAACCCAGAGAA
GGTCTCTTCTTCAACGAGAAAAAGAGTAGAAGATGCCGTACTTGAAGCGGGTTATTCTCCAAACTCATTAGCGCGTAACT
TACGTAGAAACGAATCAAAAACCATTGTCACTATCGTTCCCGACATCTGTGATCCTTATTTTTCTGAAATTATTCGCGGC
ATTGAAGATGCTGCCATGGAACATGGCTATCTAGTCCTGCTGGGCGATAGCGGACAACAGAAGAAACGCGAAAGTTCTTT
CGTTAACCTCGTATTTACTAAGCAGGCGGATGGAATGCTACTGCTTGGCACAGATCTACCGTTCGATGTCAGTAAGCCAG
AACAAAAGAACTTACCTCCGATGGTAATGGCGTGTGAATTTGCGCCAGAGTTAGAACTTCCGACAGTACATATTGACAAC
CTGACCTCAGCATTTGAAGCGGTGAATTACCTAACCCAACTAGGTCATAAACGCATCGCGCAAATCTCGGGGCCAGATAC
GGCAATATTGTGTCAGTTCCGCCAGCAAGGCTACCAACAAGCCCTGCGCCGTGCCGGCATCAATAAAGATCCACAATATA
GTGTCATTACTGAGTTCTCTTTTGATGGCGGAGCAAAAGCCGTTCGCAAACTGCTCGAATTGCCTGAGCCACCAACGGCT
ATTTTCTGTCACTGTGACACAATGGCCATCGGCGCAATTCAAGAAGCGAAAAAGCTTGGCTTACGAGTACCGCAAGATCT
CTCTGTTGTGGGCTTTGATGACATTAACTTCGCTCAGTACTGCGATCCACCGTTGACCACCATCTCTCAGCCTCGCTATG
AGATTGGTCGACAAGCAATGCTAATGATGCTCGAGATGTTAAAAGGCCACGACGTGCATTCAGGCTCGCGTTTGCTTGAA
ACTAATCTCGTCATTCGCGGAAGTGCAGCGCCACCACAGCGCCCTTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	98.204	99.701	0.979
cytR	Vibrio cholerae C6706	89.521	99.701	0.893