Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   BSBS38_RS21195 Genome accession   NZ_CP017314
Coordinates   3999946..4000794 (-) Length   282 a.a.
NCBI ID   WP_003226832.1    Uniprot ID   P26497
Organism   Bacillus subtilis strain BS38     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3994946..4005794
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSBS38_RS21175 (BSBS38_04262) yyaE 3995460..3997463 (-) 2004 WP_014481509.1 molybdopterin-dependent oxidoreductase -
  BSBS38_RS21180 (BSBS38_04263) yyzM 3997514..3997720 (-) 207 WP_003226838.1 DUF951 domain-containing protein -
  BSBS38_RS21185 (BSBS38_04264) - 3997814..3998830 (-) 1017 WP_010886647.1 membrane protein -
  BSBS38_RS21190 (BSBS38_04265) yyaC 3999290..3999907 (+) 618 WP_003243890.1 spore protease YyaC -
  BSBS38_RS21195 (BSBS38_04266) spo0J 3999946..4000794 (-) 849 WP_003226832.1 stage 0 sporulation protein Spo0J Regulator
  BSBS38_RS21200 (BSBS38_04267) soj 4000787..4001548 (-) 762 WP_003219244.1 sporulation initiation inhibitor protein Soj -
  BSBS38_RS21205 (BSBS38_04268) yyaB 4001796..4002236 (+) 441 WP_003244005.1 PH domain-containing protein -
  BSBS38_RS21210 (BSBS38_04269) noc 4002287..4003138 (-) 852 WP_003226829.1 nucleoid occlusion protein -
  BSBS38_RS21215 (BSBS38_04270) rsmG 4003260..4003979 (-) 720 WP_014481512.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -

Sequence

Protein


Download         Length: 282 a.a.        Molecular weight: 32210.16 Da        Isoelectric Point: 8.3881

>NTDB_id=168307 BSBS38_RS21195 WP_003226832.1 3999946..4000794(-) (spo0J) [Bacillus subtilis strain BS38]
MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELKESVLQHGILQPLIVRKSLKGYDIVAGERR
FRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLT
LPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESY
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES

Nucleotide


Download         Length: 849 bp        

>NTDB_id=168307 BSBS38_RS21195 WP_003226832.1 3999946..4000794(-) (spo0J) [Bacillus subtilis strain BS38]
ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTCGATTTGTCTGAAGAGACAGTTGAAGAAATTAA
AATTGCCGATTTACGCCCTAATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAACTAAAAGAATCTG
TGCTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAAATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGT
TTTCGAGCGGCAAAGCTGGCAGGTTTAGATACAGTTCCGGCCATTGTCCGTGAATTATCAGAGGCGTTAATGAGGGAAAT
TGCTTTATTAGAAAACCTTCAGCGTGAAGATTTATCTCCGCTTGAAGAGGCTCAGGCATATGACTCCTTGTTGAAACACT
TAGATCTCACACAAGAGCAGCTTGCCAAACGTCTTGGGAAAAGCAGACCGCATATTGCGAATCATTTAAGACTGCTGACA
CTGCCAGAAAATATTCAACAGCTTATTGCCGAAGGCACGCTTTCTATGGGACATGGACGCACGCTTCTTGGCTTAAAAAA
CAAAAATAAGCTTGAACCGCTGGTACAAAAAGTGATTGCGGAGCAGCTCAATGTTCGCCAGCTTGAGCAGCTGATTCAGC
AGTTGAATCAGAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTGAAAGATGCGGTTCTAAAAGAACGAGAATCCTAT
CTCCAAAATTATTTTGGAACAACAGTTAATATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA
TGAAGACCTTGACCGGATTTTAGAGCTTTTGTCTGAACGAGAATCGTAA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(163-214)

ParB/Sulfiredoxin domain (ParB_N)

(24-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 5NOC
  PDB 6SDK

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.923

92.199

0.387