Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   BSBS38_RS17820 Genome accession   NZ_CP017314
Coordinates   3350666..3351379 (-) Length   237 a.a.
NCBI ID   WP_021480675.1    Uniprot ID   -
Organism   Bacillus subtilis strain BS38     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3345666..3356379
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSBS38_RS17800 (BSBS38_03585) ghrB 3345811..3346788 (+) 978 WP_072592561.1 2-hydroxyacid dehydrogenase -
  BSBS38_RS17805 (BSBS38_03586) psdB 3346825..3348765 (-) 1941 WP_069837800.1 lantibiotic ABC transporter permease PsdB -
  BSBS38_RS17810 (BSBS38_03587) psdA 3348740..3349519 (-) 780 WP_069837801.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  BSBS38_RS17815 (BSBS38_03588) psdS 3349602..3350672 (-) 1071 WP_021480674.1 two-component sensor histidine kinase PsdS -
  BSBS38_RS17820 (BSBS38_03589) braR 3350666..3351379 (-) 714 WP_021480675.1 two-component system response regulator PsdR Regulator
  BSBS38_RS17825 - 3351526..3351734 (+) 209 Protein_3449 hypothetical protein -
  BSBS38_RS17830 (BSBS38_03591) yvcN 3351770..3352534 (-) 765 WP_015251150.1 arylamine N-acetyltransferase family protein -
  BSBS38_RS17835 (BSBS38_03592) crh 3352535..3352792 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  BSBS38_RS17840 (BSBS38_03593) whiA 3352816..3353765 (-) 950 Protein_3452 DNA-binding protein WhiA -
  BSBS38_RS17845 (BSBS38_03594) mgfK 3353788..3354741 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  BSBS38_RS17850 (BSBS38_03595) rapZ 3354743..3355630 (-) 888 WP_003243903.1 RNase adapter RapZ -
  BSBS38_RS17855 (BSBS38_03596) rppI 3355655..3356131 (-) 477 WP_014481002.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27544.41 Da        Isoelectric Point: 4.6062

>NTDB_id=168287 BSBS38_RS17820 WP_021480675.1 3350666..3351379(-) (braR) [Bacillus subtilis strain BS38]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNTPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=168287 BSBS38_RS17820 WP_021480675.1 3350666..3351379(-) (braR) [Bacillus subtilis strain BS38]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGACCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATACGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCAAGAATAG
TGGAGCTTGGCGGGCTAACGATTTATCCTGATCAAAATGAAGCGGAGTGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAATCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43