Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   BSBS38_RS15955 Genome accession   NZ_CP017314
Coordinates   2988033..2988896 (-) Length   287 a.a.
NCBI ID   WP_014480705.1    Uniprot ID   Q9FAF1
Organism   Bacillus subtilis strain BS38     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 2983033..2993896
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSBS38_RS15920 (BSBS38_03204) mrpE 2983201..2983677 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  BSBS38_RS15925 (BSBS38_03205) mrpF 2983677..2983961 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  BSBS38_RS15930 (BSBS38_03206) mnhG 2983945..2984319 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  BSBS38_RS15935 (BSBS38_03207) yuxO 2984358..2984738 (-) 381 WP_069837723.1 hotdog fold thioesterase -
  BSBS38_RS15940 (BSBS38_03208) comA 2984757..2985401 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  BSBS38_RS15945 (BSBS38_03209) comP 2985482..2987794 (-) 2313 WP_069964288.1 sensor histidine kinase Regulator
  BSBS38_RS15950 (BSBS38_03210) comX 2987810..2988031 (-) 222 WP_014480704.1 competence pheromone ComX -
  BSBS38_RS15955 (BSBS38_03211) comQ 2988033..2988896 (-) 864 WP_014480705.1 polyprenyl synthetase family protein Regulator
  BSBS38_RS15960 (BSBS38_03212) degQ 2989081..2989221 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  BSBS38_RS22060 (BSBS38_03213) - 2989443..2989568 (+) 126 WP_003228793.1 hypothetical protein -
  BSBS38_RS15965 (BSBS38_03214) - 2989683..2990051 (+) 369 WP_046381300.1 hypothetical protein -
  BSBS38_RS15970 (BSBS38_03215) pdeH 2990027..2991256 (-) 1230 WP_046381301.1 cyclic di-GMP phosphodiesterase -
  BSBS38_RS15975 (BSBS38_03216) pncB 2991392..2992864 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  BSBS38_RS15980 (BSBS38_03217) pncA 2992880..2993431 (-) 552 WP_014480709.1 cysteine hydrolase family protein -

Sequence

Protein


Download         Length: 287 a.a.        Molecular weight: 32882.57 Da        Isoelectric Point: 5.2201

>NTDB_id=168279 BSBS38_RS15955 WP_014480705.1 2988033..2988896(-) (comQ) [Bacillus subtilis strain BS38]
MKEIVDENILNEDLKVKLISFIKEKKQFSFAELAYYHYIAFDGKNDKAIELLASGIELLILSADIFDDIEDKDNLQASWM
KLDPSIATNAATALYTLSLQVIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSILGV
YLATGEYNETVEEYSRYLGIVEQIANDHYGLYYPNYNDFKTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMINNLEDLKG
KLRESGVIQYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLLRGI

Nucleotide


Download         Length: 864 bp        

>NTDB_id=168279 BSBS38_RS15955 WP_014480705.1 2988033..2988896(-) (comQ) [Bacillus subtilis strain BS38]
ATGAAGGAGATTGTGGATGAAAATATTTTAAATGAGGACTTAAAAGTGAAGCTCATTTCTTTTATCAAAGAAAAAAAACA
ATTTTCATTTGCAGAACTGGCTTATTACCATTACATAGCATTTGATGGAAAAAACGACAAAGCAATTGAGTTATTGGCGT
CAGGTATAGAACTTTTAATTTTATCTGCGGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAATTAGATCCTTCTATAGCAACTAACGCAGCTACCGCACTTTATACATTAAGTCTGCAAGTAATAGGTTCAGTCTCAAA
TCATCCAAAACTTTTAAGCCTTACTTTGCAATATTCACTCCAATCTTTACAAGGACAACATGTAGATTTGAATTTAACAG
CCTCATCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCGGGTTCTCTGGTAACATTGCCCAGTATTCTTGGTGTA
TATCTGGCAACTGGAGAATATAATGAAACAGTTGAGGAGTATTCACGTTATTTAGGTATAGTCGAGCAAATTGCAAATGA
TCACTATGGACTTTATTACCCTAACTATAATGACTTCAAAACTAGACATACGCTTGCCTTCAATTATCTTAAAAATAAAT
TTAACCAATCATCAATTGACTTATTAAATTTTTATGCGCAAGAAAATCATATGATAAATAATTTGGAAGATTTGAAGGGA
AAGTTAAGAGAATCAGGTGTAATACAATATTTGAATGTTATAAAAAATTTAGCAGTGGAAAATTTTAAGGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAAAATAAATTACTTATTCAATTATTAAGGGGGATTTAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(45-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9FAF1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45

97.561

0.439