Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   BSBS38_RS15130 Genome accession   NZ_CP017314
Coordinates   2843867..2844562 (-) Length   231 a.a.
NCBI ID   WP_017695455.1    Uniprot ID   -
Organism   Bacillus subtilis strain BS38     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2838867..2849562
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSBS38_RS15110 (BSBS38_03042) yttA 2839294..2840040 (+) 747 WP_014480618.1 LMBR1 domain-containing protein -
  BSBS38_RS15115 (BSBS38_03043) bceB 2840077..2842017 (-) 1941 WP_014480619.1 bacitracin ABC transporter permease BceB -
  BSBS38_RS15120 (BSBS38_03044) bceA 2842007..2842768 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  BSBS38_RS15125 (BSBS38_03045) bceS 2842870..2843874 (-) 1005 WP_003229135.1 two-component sensor histidine kinase BceS -
  BSBS38_RS15130 (BSBS38_03046) braR 2843867..2844562 (-) 696 WP_017695455.1 two-component response regulator BceR Regulator
  BSBS38_RS15135 (BSBS38_03047) ytrF 2844660..2845970 (-) 1311 WP_017695454.1 ABC transporter permease YtrF -
  BSBS38_RS15140 (BSBS38_03048) ytrE 2845960..2846655 (-) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  BSBS38_RS15145 (BSBS38_03049) ytrD 2846670..2847647 (-) 978 WP_014480623.1 ABC transporter permease YtrD -
  BSBS38_RS15150 (BSBS38_03050) - 2847679..2848665 (-) 987 WP_069964267.1 ABC transporter permease subunit -
  BSBS38_RS15155 (BSBS38_03051) ytrB 2848659..2849537 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26907.80 Da        Isoelectric Point: 5.3775

>NTDB_id=168276 BSBS38_RS15130 WP_017695455.1 2843867..2844562(-) (braR) [Bacillus subtilis strain BS38]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFEVLIAKIQAMFRRVHHYNTEPNTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=168276 BSBS38_RS15130 WP_017695455.1 2843867..2844562(-) (braR) [Bacillus subtilis strain BS38]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCACTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGTTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGAAGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAATACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377