Detailed information
Bioinformatically predicted
Overview
| Name | ymcA | Type | Regulator |
| Locus tag | BSBS38_RS09490 | Genome accession | NZ_CP017314 |
| Coordinates | 1808217..1808648 (+) | Length | 143 a.a. |
| NCBI ID | WP_003231834.1 | Uniprot ID | G4NVD0 |
| Organism | Bacillus subtilis strain BS38 | ||
| Function | accelerate the production of Spo0A~P (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1803217..1813648
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSBS38_RS09470 (BSBS38_01908) | spoVS | 1803779..1804039 (+) | 261 | WP_003154135.1 | stage V sporulation protein SpoVS | - |
| BSBS38_RS09475 (BSBS38_01909) | tdh | 1804304..1805347 (+) | 1044 | WP_014479818.1 | L-threonine 3-dehydrogenase | - |
| BSBS38_RS09480 (BSBS38_01910) | kbl | 1805360..1806538 (+) | 1179 | WP_014479819.1 | glycine C-acetyltransferase | - |
| BSBS38_RS09485 (BSBS38_01911) | miaB | 1806686..1808215 (+) | 1530 | WP_014664026.1 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | - |
| BSBS38_RS09490 (BSBS38_01912) | ymcA | 1808217..1808648 (+) | 432 | WP_003231834.1 | regulatory iron-sulfur-containing complex subunit RicA | Regulator |
| BSBS38_RS09495 (BSBS38_01913) | cotE | 1808910..1809455 (+) | 546 | WP_003231833.1 | outer spore coat protein CotE | - |
| BSBS38_RS09500 (BSBS38_01914) | hexA | 1809588..1812164 (+) | 2577 | WP_046160418.1 | DNA mismatch repair protein MutS | Machinery gene |
Sequence
Protein
Download Length: 143 a.a. Molecular weight: 16166.27 Da Isoelectric Point: 5.0437
>NTDB_id=168232 BSBS38_RS09490 WP_003231834.1 1808217..1808648(+) (ymcA) [Bacillus subtilis strain BS38]
MTLYSKKDIVQQARNLAKMISETEEVDFFKRAEAQINENDKVSTIVNQIKALQKQAVNLKHYEKHEALKQVEAKIDALQE
ELEEIPVIQEFRDSQMEVNDLLQLVAHTISNQVTNEIITSTGGDLLKGETGSKVKHSNNSCSL
MTLYSKKDIVQQARNLAKMISETEEVDFFKRAEAQINENDKVSTIVNQIKALQKQAVNLKHYEKHEALKQVEAKIDALQE
ELEEIPVIQEFRDSQMEVNDLLQLVAHTISNQVTNEIITSTGGDLLKGETGSKVKHSNNSCSL
Nucleotide
Download Length: 432 bp
>NTDB_id=168232 BSBS38_RS09490 WP_003231834.1 1808217..1808648(+) (ymcA) [Bacillus subtilis strain BS38]
ATGACGCTCTACTCAAAAAAAGACATTGTGCAGCAGGCACGAAACCTTGCAAAAATGATTTCTGAAACAGAAGAGGTTGA
TTTTTTCAAACGGGCTGAAGCGCAAATCAATGAGAATGACAAAGTGTCCACAATCGTTAATCAGATTAAAGCCCTGCAAA
AACAGGCTGTCAATCTGAAGCATTATGAAAAGCATGAAGCGCTCAAACAAGTAGAAGCAAAAATTGACGCGCTGCAAGAA
GAGCTTGAAGAGATTCCTGTTATCCAGGAATTCAGAGACTCGCAGATGGAAGTAAATGACCTACTGCAGCTCGTTGCACA
CACCATTTCCAATCAAGTCACAAATGAAATCATCACATCAACCGGAGGCGACCTGCTGAAAGGGGAAACCGGTTCAAAGG
TGAAGCATTCAAATAACAGCTGTTCTCTCTAA
ATGACGCTCTACTCAAAAAAAGACATTGTGCAGCAGGCACGAAACCTTGCAAAAATGATTTCTGAAACAGAAGAGGTTGA
TTTTTTCAAACGGGCTGAAGCGCAAATCAATGAGAATGACAAAGTGTCCACAATCGTTAATCAGATTAAAGCCCTGCAAA
AACAGGCTGTCAATCTGAAGCATTATGAAAAGCATGAAGCGCTCAAACAAGTAGAAGCAAAAATTGACGCGCTGCAAGAA
GAGCTTGAAGAGATTCCTGTTATCCAGGAATTCAGAGACTCGCAGATGGAAGTAAATGACCTACTGCAGCTCGTTGCACA
CACCATTTCCAATCAAGTCACAAATGAAATCATCACATCAACCGGAGGCGACCTGCTGAAAGGGGAAACCGGTTCAAAGG
TGAAGCATTCAAATAACAGCTGTTCTCTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ymcA | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |