Detailed information NTG0168181

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: BSBS38_RS02885
• Genome accession: NZ_CP017314
• Coordinates: 547938..549083 (+)
• Length: 381 a.a.
• NCBI ID: WP_155118109.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain BS38
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 542938..554083

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSBS38_RS02860 (BSBS38_00577)	yddF	543000..543326 (+)	327	WP_069964000.1	YddF family protein	-
BSBS38_RS02865 (BSBS38_00578)	-	543330..545765 (+)	2436	WP_080478388.1	CD3337/EF1877 family mobilome membrane protein	-
BSBS38_RS02870 (BSBS38_00579)	-	545762..546750 (+)	989	Protein_512	lysozyme family protein	-
BSBS38_RS02875 (BSBS38_00580)	-	546765..547271 (+)	507	WP_069964002.1	hypothetical protein	-
BSBS38_RS02880 (BSBS38_00581)	-	547334..547720 (+)	387	WP_396127098.1	cystatin-like fold lipoprotein	-
BSBS38_RS02885 (BSBS38_00582)	rapF	547938..549083 (+)	1146	WP_155118109.1	tetratricopeptide repeat protein	Regulator
BSBS38_RS02890 (BSBS38_00584)	-	549242..550333 (-)	1092	WP_069964004.1	DNA cytosine methyltransferase	-
BSBS38_RS02895 (BSBS38_00585)	-	550388..551725 (-)	1338	WP_069964005.1	LlaJI family restriction endonuclease	-
BSBS38_RS02900 (BSBS38_00586)	-	551722..553452 (-)	1731	WP_069964006.1	AAA family ATPase	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45266.84 Da
• Isoelectric Point: 5.4113

>NTDB_id=168181 BSBS38_RS02885 WP_155118109.1 547938..549083(+) (rapF) [Bacillus subtilis strain BS38]
MEPVFLMKGKIPYDLVTKKLNAWYTAIKNDRVEQAENIKQEVEMELKSIEENQDALLYYQLLEFRHEIMLSYMESKRIDN
LTSTYETIKEIEEQGQLTGMLEYYFYFFKGMYEFRRKELTTAISAYRVAETKLSEVEDEIEKAEFFFKVSYVYYYMKQTY
FSMNYANRALNIFKDYDEYAVQTIRCQFIVAGNYIDSMEFEKALNVFFNSLDVAKSINSDHLIGMSHINIGICFDELKQY
EDAATHLEISLKLLEKKNNSFLPKALFILTHVKAKQNDLKASLTYFKKGRFYSKINKDLEYDAKFKILEGLYFSNGEYQL
IEDAFAYLESKKMFADVENYAIDVGDFFHERGKLLLSNEYYRMSIEARRKIKKGEIKHENL

Nucleotide

• Length: 1146 bp

>NTDB_id=168181 BSBS38_RS02885 WP_155118109.1 547938..549083(+) (rapF) [Bacillus subtilis strain BS38]
GTGGAGCCGGTTTTCTTGATGAAGGGGAAGATTCCATATGATCTTGTTACTAAAAAATTAAATGCTTGGTATACAGCGAT
CAAAAACGATCGTGTGGAACAAGCGGAAAATATTAAACAAGAAGTAGAAATGGAGCTAAAAAGTATTGAAGAAAATCAAG
ATGCTTTGTTGTATTATCAGTTATTAGAATTTAGACATGAAATAATGTTGAGTTATATGGAATCAAAAAGAATTGACAAT
CTGACAAGTACTTATGAAACAATTAAGGAGATAGAAGAGCAAGGGCAATTGACAGGTATGCTTGAATATTATTTCTATTT
TTTTAAGGGGATGTATGAGTTCAGGAGAAAAGAGTTAACAACAGCGATCAGTGCTTACAGAGTAGCTGAAACTAAGTTAT
CGGAGGTAGAGGATGAGATAGAGAAAGCTGAATTTTTCTTTAAGGTGTCGTATGTTTACTATTATATGAAGCAAACTTAC
TTCTCAATGAATTATGCAAATCGAGCACTTAACATATTTAAAGATTATGATGAATATGCTGTTCAAACAATTCGGTGTCA
GTTTATTGTTGCAGGCAATTATATTGATTCGATGGAATTTGAAAAGGCCCTCAATGTCTTTTTTAATTCACTTGACGTTG
CAAAAAGTATAAATAGTGATCATCTAATTGGGATGTCTCATATAAATATTGGCATCTGTTTTGATGAGTTAAAGCAATAT
GAAGATGCAGCGACTCATTTAGAAATATCCTTGAAATTGCTTGAAAAGAAAAATAATTCATTTTTACCAAAGGCTTTGTT
TATTTTGACACATGTGAAGGCAAAACAGAACGATTTAAAAGCATCTTTAACATATTTTAAAAAAGGTCGATTCTATTCAA
AAATAAATAAAGATCTTGAATATGATGCAAAATTTAAAATCTTAGAAGGACTTTACTTTTCTAATGGTGAATATCAACTC
ATAGAAGATGCATTTGCATATCTTGAATCGAAAAAGATGTTTGCTGATGTTGAAAATTATGCAATTGATGTGGGTGATTT
TTTTCATGAACGAGGAAAATTATTACTGTCTAATGAATATTATCGTATGAGTATTGAAGCAAGACGTAAAATCAAAAAAG
GAGAGATTAAACATGAAAATTTGTAG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (10-70)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	38.133	98.425	0.375
rapC	Bacillus subtilis subsp. subtilis str. 168	37.234	98.688	0.367