Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | AL494_RS06390 | Genome accession | NZ_CP014057 |
| Coordinates | 1292696..1293670 (+) | Length | 324 a.a. |
| NCBI ID | WP_011303021.1 | Uniprot ID | A0A380HM33 |
| Organism | Staphylococcus saprophyticus strain FDAARGOS_137 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1287696..1298670
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AL494_RS06355 (AL494_06295) | rpmG | 1288116..1288265 (+) | 150 | WP_002483181.1 | 50S ribosomal protein L33 | - |
| AL494_RS06360 (AL494_06300) | - | 1288474..1289019 (+) | 546 | WP_011303016.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| AL494_RS06365 (AL494_06305) | - | 1289031..1290488 (+) | 1458 | WP_048787226.1 | rhomboid family protein | - |
| AL494_RS06370 (AL494_06310) | - | 1290472..1290669 (+) | 198 | WP_037538382.1 | YqgQ family protein | - |
| AL494_RS06375 (AL494_06315) | - | 1290673..1291659 (+) | 987 | WP_011303019.1 | glucokinase | - |
| AL494_RS06380 (AL494_06320) | - | 1291659..1291985 (+) | 327 | WP_002483185.1 | MTH1187 family thiamine-binding protein | - |
| AL494_RS06385 (AL494_06325) | - | 1291985..1292608 (+) | 624 | WP_011303020.1 | MBL fold metallo-hydrolase | - |
| AL494_RS06390 (AL494_06330) | comGA | 1292696..1293670 (+) | 975 | WP_011303021.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AL494_RS06395 (AL494_06335) | comGB | 1293642..1294706 (+) | 1065 | WP_011303022.1 | competence type IV pilus assembly protein ComGB | - |
| AL494_RS06400 (AL494_06340) | comGC | 1294734..1295045 (+) | 312 | WP_011303023.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AL494_RS06405 (AL494_06345) | comGD | 1295026..1295481 (+) | 456 | WP_225791589.1 | competence type IV pilus minor pilin ComGD | - |
| AL494_RS06415 (AL494_06355) | comGF | 1295739..1296182 (+) | 444 | WP_011303025.1 | competence type IV pilus minor pilin ComGF | - |
| AL494_RS06425 (AL494_06365) | - | 1296386..1296859 (+) | 474 | WP_002483192.1 | shikimate kinase | - |
| AL494_RS06430 (AL494_06370) | gcvT | 1297043..1298134 (+) | 1092 | WP_011303027.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36606.84 Da Isoelectric Point: 9.7041
>NTDB_id=168164 AL494_RS06390 WP_011303021.1 1292696..1293670(+) (comGA) [Staphylococcus saprophyticus strain FDAARGOS_137]
MKLLFNNILKKAISTKATDVHFIPSNDKIYIKFRVQDTLAPIESIQQHIYLKLLTYMKYQAGLDVSKHNVAQSGRYTYKF
KQIYFLRISTLPLSLGIESCVIRIVPQYFQKGSDTSNLGTLYKLMNKKQGLILLSGPTGSGKSTLMYQMVMHAKEQLDLN
IITVEDPVEQLVSGITQVSINEKAGINYANTFKAILRCDPDIILIGEIRDAIIAKQVMHASLSGHLVLTTIHANNCKGAL
LRLKEMGLTMQEMKQALLTVLNQRLITTYNNQRKLVYEQLTKAQINHLIDNDYTLPSSFSNLSTQLTQLAKAGVICEETM
ERYI
MKLLFNNILKKAISTKATDVHFIPSNDKIYIKFRVQDTLAPIESIQQHIYLKLLTYMKYQAGLDVSKHNVAQSGRYTYKF
KQIYFLRISTLPLSLGIESCVIRIVPQYFQKGSDTSNLGTLYKLMNKKQGLILLSGPTGSGKSTLMYQMVMHAKEQLDLN
IITVEDPVEQLVSGITQVSINEKAGINYANTFKAILRCDPDIILIGEIRDAIIAKQVMHASLSGHLVLTTIHANNCKGAL
LRLKEMGLTMQEMKQALLTVLNQRLITTYNNQRKLVYEQLTKAQINHLIDNDYTLPSSFSNLSTQLTQLAKAGVICEETM
ERYI
Nucleotide
Download Length: 975 bp
>NTDB_id=168164 AL494_RS06390 WP_011303021.1 1292696..1293670(+) (comGA) [Staphylococcus saprophyticus strain FDAARGOS_137]
TTGAAACTTTTATTTAATAATATACTTAAAAAAGCGATTAGTACAAAGGCCACTGATGTGCACTTTATTCCTTCAAATGA
CAAAATATATATTAAATTCAGAGTTCAAGATACGCTTGCACCAATTGAATCCATACAGCAACATATTTATTTGAAATTAT
TAACCTATATGAAATATCAAGCTGGTTTAGATGTGTCTAAACATAATGTTGCTCAAAGTGGTAGATATACTTACAAATTC
AAGCAAATTTACTTTTTAAGAATATCCACGCTACCTTTATCTCTGGGAATAGAAAGTTGTGTTATCAGAATTGTTCCACA
GTATTTTCAAAAAGGAAGTGATACAAGTAATTTAGGTACATTATATAAATTAATGAATAAAAAACAGGGGCTTATATTAT
TAAGTGGACCCACTGGTTCCGGAAAAAGCACTTTAATGTATCAAATGGTCATGCATGCAAAAGAGCAGTTAGATTTAAAT
ATCATAACAGTTGAAGATCCAGTGGAGCAGCTAGTATCTGGAATTACACAAGTATCGATTAATGAAAAAGCAGGTATCAA
TTATGCAAATACTTTTAAAGCGATTTTAAGATGTGATCCTGACATTATTTTGATTGGTGAAATTAGAGATGCCATAATAG
CTAAACAAGTAATGCATGCGAGTCTAAGTGGTCATTTAGTATTAACAACAATTCACGCTAATAACTGTAAAGGCGCATTA
TTAAGGCTTAAAGAAATGGGACTAACGATGCAAGAAATGAAACAAGCTTTATTAACCGTTTTAAACCAAAGACTAATTAC
GACTTATAATAATCAAAGAAAACTTGTATATGAACAACTTACTAAAGCACAAATAAATCATTTAATAGACAATGACTATA
CATTACCTAGTTCATTTTCTAATTTGTCTACTCAATTAACTCAATTAGCCAAAGCAGGTGTTATTTGTGAGGAAACTATG
GAGCGCTATATTTAA
TTGAAACTTTTATTTAATAATATACTTAAAAAAGCGATTAGTACAAAGGCCACTGATGTGCACTTTATTCCTTCAAATGA
CAAAATATATATTAAATTCAGAGTTCAAGATACGCTTGCACCAATTGAATCCATACAGCAACATATTTATTTGAAATTAT
TAACCTATATGAAATATCAAGCTGGTTTAGATGTGTCTAAACATAATGTTGCTCAAAGTGGTAGATATACTTACAAATTC
AAGCAAATTTACTTTTTAAGAATATCCACGCTACCTTTATCTCTGGGAATAGAAAGTTGTGTTATCAGAATTGTTCCACA
GTATTTTCAAAAAGGAAGTGATACAAGTAATTTAGGTACATTATATAAATTAATGAATAAAAAACAGGGGCTTATATTAT
TAAGTGGACCCACTGGTTCCGGAAAAAGCACTTTAATGTATCAAATGGTCATGCATGCAAAAGAGCAGTTAGATTTAAAT
ATCATAACAGTTGAAGATCCAGTGGAGCAGCTAGTATCTGGAATTACACAAGTATCGATTAATGAAAAAGCAGGTATCAA
TTATGCAAATACTTTTAAAGCGATTTTAAGATGTGATCCTGACATTATTTTGATTGGTGAAATTAGAGATGCCATAATAG
CTAAACAAGTAATGCATGCGAGTCTAAGTGGTCATTTAGTATTAACAACAATTCACGCTAATAACTGTAAAGGCGCATTA
TTAAGGCTTAAAGAAATGGGACTAACGATGCAAGAAATGAAACAAGCTTTATTAACCGTTTTAAACCAAAGACTAATTAC
GACTTATAATAATCAAAGAAAACTTGTATATGAACAACTTACTAAAGCACAAATAAATCATTTAATAGACAATGACTATA
CATTACCTAGTTCATTTTCTAATTTGTCTACTCAATTAACTCAATTAGCCAAAGCAGGTGTTATTTGTGAGGAAACTATG
GAGCGCTATATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
62.037 |
100 |
0.62 |
| comGA | Staphylococcus aureus N315 |
62.037 |
100 |
0.62 |